Pairwise Alignments

Query, 408 a.a., NADH:ubiquinone reductase (Na(+)-transporting) subunit F from Vibrio cholerae E7946 ATCC 55056

Subject, 331 a.a., hypothetical protein from Sphingobium sp. HT1-2

 Score = 81.3 bits (199), Expect = 4e-20
 Identities = 91/366 (24%), Positives = 145/366 (39%), Gaps = 70/366 (19%)

Query: 52  GGKLLTALAGAGVFVSSACGGGGSCGQCRVKIKSGGGDILPTELDH--ISKGEAREGERL 109
           G  ++ A   A + + S C  G SCG C  +  +G  D+    +D   +   E   G   
Sbjct: 21  GETVVEAALNAELPLRSDCMSG-SCGSCIARCTAG--DVSRDAMDQPIVDADEIVAGIYP 77

Query: 110 ACQVAVKAD----MDLELPEEIFGVKKWECTVISNDNKATFIKELKLAIPDGESVPFRAG 165
            C   + +D    +D  L  +     +    ++  D  AT I  L + + D ++  F+ G
Sbjct: 78  TCLTRLLSDAHFELDYPLAPQPSPAGRQRGRLVRIDRLATTISRLIIEVEDPDNFRFQPG 137

Query: 166 GYIQIEAPAHHVKYADFDVPEKYRGDWDKFNLFRYESKVDEPIIRAYSMANYPEEFGIIM 225
            Y+++  P   V                                RAYS+A+ P+   +I 
Sbjct: 138 QYLRLRPPGLKVA-------------------------------RAYSIASAPDALPMIE 166

Query: 226 LNVRIATPPPNNPNVPPGQMSSYIWS--LKAGDKCTISGPFGEFFAKDTDAEMVFIGGGA 283
           L +R         +VP GQ+S ++ S    AG K T+ GP G F   D     VFI GG 
Sbjct: 167 LLIR---------HVPGGQVSGWLDSDAAAAGAKLTLQGPLGGFALDDRAERAVFIAGGT 217

Query: 284 GMAPMRSHIFDQLKRLKSKRKMSYWYGARSKREMFYVEDFDGLAAENDNFVWHCALSDPQ 343
           G+AP  S     ++    KR M   +G   + ++F  ++   LAA         AL +  
Sbjct: 218 GLAPALS----MIRASGGKRPMLLCFGCSRREDLFLEDELRHLAATTAGLEVRIALME-- 271

Query: 344 PEDNWTGYTGFIHNVLYENYLKDHEAPED---CEYYMCGPPMMNAAVINMLKNLGVEEEN 400
                 G +G I +      L    APED     +++CGPP M  A   +L+  G+   +
Sbjct: 272 ------GASGSIASGTAVALL----APEDIAGASHHLCGPPAMVDAARTVLRAAGIAPGH 321

Query: 401 ILLDDF 406
           I  + F
Sbjct: 322 IRAERF 327