Pairwise Alignments

Query, 408 a.a., NADH:ubiquinone reductase (Na(+)-transporting) subunit F from Vibrio cholerae E7946 ATCC 55056

Subject, 335 a.a., naphthalene 1,2-dioxygenase from Agrobacterium fabrum C58

 Score = 89.4 bits (220), Expect = 1e-22
 Identities = 90/369 (24%), Positives = 158/369 (42%), Gaps = 58/369 (15%)

Query: 45  KAIVTQPGGKLLTALAGAGVFVSSACGGGGSCGQCRVKIKSGGGDILPTELDHISKGEAR 104
           ++I+   G  +L A   AG+     C  G  CG C+  + SG  D+L      +++ E  
Sbjct: 13  RSIMAAEGETVLQAALAAGIAYPRGCRMG-RCGACKSHLISGEIDLLKHTPFSLTEEEKA 71

Query: 105 EGERLACQVAVKADMD---LELPEEIFGVK--KWECTVISNDNKATFIKELKLAIPDGES 159
           EG  LAC+    +D+    L+  +E   +   ++E  V    +    IK +++ + D   
Sbjct: 72  EGLTLACRAVPASDVTIGWLDGEDEFADIPTGRFEGVVEEAVDATHDIKLIRIRLEDRAQ 131

Query: 160 VPFRAGGYIQIEAPAHHVKYADFDVPEKYRGDWDKFNLFRYESKVDEPIIRAYSMANYPE 219
             F+ G Y+++  P    +  D+ +                 S+VDE +I          
Sbjct: 132 FTFKPGQYVRLLYPDSSPR--DYSIA----------------SRVDEELI---------- 163

Query: 220 EFGIIMLNVRIATPPPNNPNVPPGQMSSYIWSL-KAGDKCTISGPFGEFFAKDTDAEMVF 278
           EF I               +VP G  S  I+SL +AGD  TI GPFG  F ++     + 
Sbjct: 164 EFHI--------------RHVPGGMTSGRIFSLARAGDPVTIVGPFGSSFLREKHCGPIL 209

Query: 279 -IGGGAGMAPMRSHIFDQLKRLKSKRKMSYWYGARSKREMFYVEDFDGLAAENDNFVWHC 337
            I GG+G+AP+++ + +       +R +  ++GAR++R+++ ++ F  L   + N  +  
Sbjct: 210 GIAGGSGLAPVKA-VVEAALATGRERPVHVYFGARAERDLYMLDRFQDLTTRHGNLSFVP 268

Query: 338 ALSDPQPEDNWTGYTGFIHNVLYENYLKDHEAPEDCEYYMCGPPMMNAAVINMLKNLGVE 397
            LS+    +   GY G            D +  +  + Y+ GPP M  A +  L   G+ 
Sbjct: 269 VLSNEDHANIRRGYVG-------AAVADDFDDLDGWKAYIAGPPAMIEATVPQLLARGMR 321

Query: 398 EENILLDDF 406
             +I  D F
Sbjct: 322 TADIHADVF 330