Pairwise Alignments

Query, 360 a.a., DNA polymerase IV from Vibrio cholerae E7946 ATCC 55056

Subject, 364 a.a., DNA polymerase IV from Rhodanobacter sp000427505 FW510-R12

 Score =  233 bits (595), Expect = 5e-66
 Identities = 142/301 (47%), Positives = 184/301 (61%), Gaps = 8/301 (2%)

Query: 6   RKIIHVDMDCFFAAVEMRDNPAYREIALAVGGHEKQRGVISTCNYQARKFGVRSAMPTAQ 65
           RKI+HVDMD F+A+VE RD+P+ R   +AV      R V+   +Y+AR FGVRSAMP  +
Sbjct: 10  RKILHVDMDAFYASVEQRDDPSLRGKPVAVAWRGA-RSVVCAASYEARVFGVRSAMPAIR 68

Query: 66  ALKLCPQLHVVPGRMSVYKSVSQQIQTIFQRYTSLIEPLSLDEAYLDVSESTAYQGSATL 125
           A +LCPQL  VP     YK+VS+QI+ IF R+T LIEPLSLDEAYLDV+ + +  GSAT 
Sbjct: 69  AERLCPQLIFVPPDFVRYKAVSRQIREIFARHTELIEPLSLDEAYLDVTTTKSALGSATA 128

Query: 126 IAQAIRRDIWQELNLTASAGVAPIKFLAKVASDLNKPDGLYVVTPDKVQEMVDSLPLEKI 185
            A+AIR  I +E  LTASAGVAP KFLAK+ASD  KPDGLYVV P +V   +  LP+ ++
Sbjct: 129 TAEAIRAAIREETRLTASAGVAPNKFLAKIASDFRKPDGLYVVRPQQVVAFLTPLPVGRL 188

Query: 186 PGVGKVALEKLHQAGLYVGADVRRADYRKLLHQFGRLGASLWKKSHGIDEREVVTERERK 245
           PGVGKV   KL   G+    ++R     +L  +FGR G  L + S GIDER V  ER   
Sbjct: 189 PGVGKVMEAKLAVLGIATVGELRAFAPVELEQRFGRWGQRLHELSRGIDERPVEPERPTL 248

Query: 246 SVGVEYTFSQNISTFQECWQVIEQKLYPELDARLSRAHPQRGIIKQGI--KVKFADFQQT 303
            V  E TF  ++   Q     +E  +    D   +    +RG + + +  K+K ADF   
Sbjct: 249 QVSAEDTFEHDLRLDQ-----LEPHIRRLADKAWTAHLRERGRVARTVVLKLKTADFHTL 303

Query: 304 T 304
           T
Sbjct: 304 T 304