Pairwise Alignments

Query, 360 a.a., DNA polymerase IV from Vibrio cholerae E7946 ATCC 55056

Subject, 415 a.a., DNA polymerase IV from Variovorax sp. OAS795

 Score =  156 bits (394), Expect = 1e-42
 Identities = 105/334 (31%), Positives = 170/334 (50%), Gaps = 36/334 (10%)

Query: 5   IRKIIHVDMDCFFAAVEMRDNPAYREIALAVGGHEKQ----------------------- 41
           IR+I H+DMD FFA+VE+   P  + + + +GG  +                        
Sbjct: 11  IRRIAHLDMDAFFASVELLRYPQLKGLPVVIGGGRRSVDEAIRHVPEGGTLADIPVSAFP 70

Query: 42  -------RGVISTCNYQARKFGVRSAMPTAQALKLCPQLHVVPGRMSVYKSVSQQIQTIF 94
                  RGVI+T  Y AR+FGV SAM   +A KLCPQ  ++P      +  S+  + I 
Sbjct: 71  RLKDYAGRGVITTATYPARQFGVGSAMGLMKAAKLCPQAIILPVDFDEIRKYSRAFKEII 130

Query: 95  QRYTSLIEPLSLDEAYLDVSESTAYQ-GSATLIAQAIRRDIWQELNLTASAGVAPIKFLA 153
           +    L+E   +DE Y+D ++    Q      +A+ I++ I     LT S GVAP K +A
Sbjct: 131 REVAPLMEDRGVDEVYIDFTDVPGGQREGGRSLARLIQKAILDATGLTCSIGVAPNKLIA 190

Query: 154 KVASDLNKPDGLYVVTPDKVQEMVDSLPLEKIPGVGKVALEKLHQAGLYVGADVRRADYR 213
           K+AS+ NKP+G+ VV  D +Q  +  LP  K+ G+G  A EKL + G+     +   D  
Sbjct: 191 KMASEFNKPNGISVVYEDDLQARIWPLPCRKVNGIGPKADEKLKRFGIETVGQLAARDRD 250

Query: 214 KLLHQFGR-LGASLWKKSHGIDEREVVTERERKSVGVEYTFSQNISTFQECWQVIEQKLY 272
            L+  FG+  GA + + + G D+R VVTE E  S+  E TF +++   ++  ++    ++
Sbjct: 251 WLIQNFGKSTGAWMHEVAWGRDDRPVVTESEPVSMSRETTFDRDLHAVRDRAEL--GAIF 308

Query: 273 PELDARLSRAHPQRGIIKQ--GIKVKFADFQQTT 304
             L  +L+    ++G + +  GIK+++ DF+  T
Sbjct: 309 THLCEKLAEDLQRKGYVGKTIGIKLRYDDFKIAT 342