Pairwise Alignments

Query, 360 a.a., DNA polymerase IV from Vibrio cholerae E7946 ATCC 55056

Subject, 356 a.a., DNA polymerase IV from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  241 bits (615), Expect = 2e-68
 Identities = 143/345 (41%), Positives = 204/345 (59%), Gaps = 18/345 (5%)

Query: 5   IRKIIHVDMDCFFAAVEMRDNPAYREIALAVGGHEKQRGVISTCNYQARKFGVRSAMPTA 64
           +RKIIH+DMD FFA+VE RDNP  R   +AVGG  + RGV++  +Y+ARK+GV SA+ + 
Sbjct: 1   MRKIIHIDMDAFFASVEQRDNPELRGKPVAVGG-SRARGVVAAASYEARKYGVHSALASK 59

Query: 65  QALKLCPQLHVVPGRMSVYKSVSQQIQTIFQRYTSLIEPLSLDEAYLDVSESTAYQGSAT 124
            A + CP L  V  R  VY +VS+QI+ IF  YT L+EPLSLDEAYLDV+E+     SA+
Sbjct: 60  IASQRCPHLIFVKARFEVYSAVSRQIREIFHAYTDLVEPLSLDEAYLDVTENKIGMPSAS 119

Query: 125 LIAQAIRRDIWQELNLTASAGVAPIKFLAKVASDLNKPDGLYVVTPDKVQEMVDSLPLEK 184
           +IA  IR  I +E  LTASAGV+  KFLAK+ASD+NKP+G  ++TPD  + +V  L +EK
Sbjct: 120 IIANEIRARILEETGLTASAGVSYNKFLAKIASDMNKPNGFTLITPDVAENLVAGLVIEK 179

Query: 185 IPGVGKVALEKLHQAGLYVGADVRRADYRKLLHQFGRLGASLWKKSHGIDEREVVTERER 244
             G+GKV   K+   G+  GAD+R+    +L+  FG++G   ++ +   D+REV   R R
Sbjct: 180 FHGIGKVTAAKMQAMGILTGADLRQRTEEELVRHFGKVGRYYYRIARAQDDREVQPHRIR 239

Query: 245 KSVGVEYTFSQNISTFQECWQVIEQKLYPELDARLSRAHPQRGIIK-----QGIKVKFAD 299
           KS+G E TF  ++        V E  +  +LD+           +K       +K+K+ D
Sbjct: 240 KSIGSERTFDVDL--------VEEHDMLLQLDSLCQEVAQDMERLKVTAKTVTLKIKYFD 291

Query: 300 FQQTTIE--HVHPALELDYFHELLEQVLTRQQ--GREIRLLGLSV 340
           F Q T     +      D  + ++  +L   Q     +RLLG+SV
Sbjct: 292 FTQNTRSKTFLSEFSSADAMYTIVRDLLRTPQLPLYPVRLLGVSV 336