Pairwise Alignments

Query, 360 a.a., DNA polymerase IV from Vibrio cholerae E7946 ATCC 55056

Subject, 422 a.a., DNA polymerase V subunit UmuC (NCBI) from Escherichia coli BW25113

 Score = 54.7 bits (130), Expect = 4e-12
 Identities = 49/216 (22%), Positives = 99/216 (45%), Gaps = 11/216 (5%)

Query: 12  DMDCFFAAVEMRDNPAYREIALAVGGHEKQRGVISTCNYQARKFGVRSAMPTAQALKLCP 71
           D++ F+A+ E    P      + V  +    G +   N +A+  GV+   P  +   L  
Sbjct: 6   DVNAFYASCETVFRPDLWGKPVVVLSNND--GCVIARNAEAKALGVKMGDPWFKQKDLFR 63

Query: 72  QLHVV--PGRMSVYKSVSQQIQTIFQRYTSLIEPLSLDEAYLDVSESTAYQGSATLIAQA 129
           +  VV       +Y  +S ++ +  +  +  +E  S+DEA+ D++     +   T   + 
Sbjct: 64  RCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCR-DLTDFGRE 122

Query: 130 IRRDIWQELNLTASAGVAPIKFLAKVASDLNK-----PDGLYVVTP-DKVQEMVDSLPLE 183
           IR  + Q  +LT   G+A  K LAK+A+   K       G+  ++  ++ ++++ +LP++
Sbjct: 123 IRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVD 182

Query: 184 KIPGVGKVALEKLHQAGLYVGADVRRADYRKLLHQF 219
            + G+G+   +KL   G+    D+   D R +   F
Sbjct: 183 DVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHF 218