Pairwise Alignments

Query, 360 a.a., DNA polymerase IV from Vibrio cholerae E7946 ATCC 55056

Subject, 352 a.a., DNA polymerase IV from Dickeya dadantii 3937

 Score =  374 bits (959), Expect = e-108
 Identities = 198/345 (57%), Positives = 256/345 (74%), Gaps = 3/345 (0%)

Query: 5   IRKIIHVDMDCFFAAVEMRDNPAYREIALAVGGHEKQRGVISTCNYQARKFGVRSAMPTA 64
           +RKIIHVDMDCF+AA+EMRDNP  R+I LA+GG   +RGVI T NY AR++GV SAM TA
Sbjct: 1   MRKIIHVDMDCFYAAIEMRDNPRLRDIPLAIGGSADRRGVICTANYPARRYGVHSAMATA 60

Query: 65  QALKLCPQLHVVPGRMSVYKSVSQQIQTIFQRYTSLIEPLSLDEAYLDVSESTAYQGSAT 124
            AL+LCP L ++PGRM VYK+ S QI+ IF RYTSLIEPLSLDEAYLDV++S    GSAT
Sbjct: 61  TALRLCPHLTLLPGRMEVYKAASYQIRQIFSRYTSLIEPLSLDEAYLDVTDSPHCGGSAT 120

Query: 125 LIAQAIRRDIWQELNLTASAGVAPIKFLAKVASDLNKPDGLYVVTPDKVQEMVDSLPLEK 184
           L+AQ IR+ I+ EL+LTASAGVAPIKFLAKVAS+ NKP+G YV++P +++  + +LPLEK
Sbjct: 121 LMAQEIRQAIFNELHLTASAGVAPIKFLAKVASEQNKPNGQYVISPAQMEAFLLALPLEK 180

Query: 185 IPGVGKVALEKLHQAGLYVGADVRRADYRKLLHQFGRLGASLWKKSHGIDEREVVTERER 244
           IPGVGKV  ++L + GL+  ADVRR    +LL +FG+ G  LW++ HGIDER+V  +R R
Sbjct: 181 IPGVGKVTAKRLAECGLHTCADVRRYALTELLREFGKFGRILWERCHGIDERQVSPDRLR 240

Query: 245 KSVGVEYTFSQNISTFQECWQVIEQKLYPELDARLSRAHPQRGIIKQGIKVKFADFQQTT 304
           KSVGVE T +Q+I  +  C  +IE +LY EL+ RL R  P   I +QG+K+KF DF+QTT
Sbjct: 241 KSVGVEKTLAQDIHDWTACEALIE-RLYDELELRLRRVRPDLHIARQGVKLKFDDFRQTT 299

Query: 305 IEHVHPAL-ELDYFHELLEQVLTRQQGREIRLLGLSV-MLKPELQ 347
            EHV P L + D      E    R++ R +RL+GL V ++ P+L+
Sbjct: 300 QEHVWPVLNKPDLLKLARESWDQRREARGVRLVGLHVSLIDPQLE 344