Pairwise Alignments

Query, 360 a.a., DNA polymerase IV from Vibrio cholerae E7946 ATCC 55056

Subject, 398 a.a., Nucleotidyltransferase/DNA polymerase involved in DNA repair from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  138 bits (347), Expect = 3e-37
 Identities = 97/338 (28%), Positives = 168/338 (49%), Gaps = 12/338 (3%)

Query: 6   RKIIHVDMDCFFAAVEMRDNPAYREIALAVGGHEKQRGVISTCNYQARKFGVRSAMPTAQ 65
           R I+H+D+D FF +VE   +   +   + +GG    RGV+++C+Y+AR +G+ SAMP   
Sbjct: 7   RSIVHMDLDSFFVSVERLFDNRLKGRPILIGG-TGDRGVVASCSYEARVYGIHSAMPMRT 65

Query: 66  ALKLCPQLHVVPGRMSVYKSVSQQIQTIFQRYTSLIEPLSLDEAYLDVSESTAYQGSATL 125
           A +LCP+  ++ G    Y   S +I  I +    L E  S+DE Y+D S    + G   +
Sbjct: 66  ARQLCPEALIIRGDSERYSQKSHEITEIIRESVPLFEKSSIDEFYIDYSGMDRFFGCFKM 125

Query: 126 IAQAIRRDIWQELNLTASAGVAPIKFLAKVASDLNKPDGLYVVTPDKVQEMVDSLPLEKI 185
            A  +R+ I +E  L  S G++  K ++KVA+   KP+    V     +  +  L + KI
Sbjct: 126 -AHELRQKIIKETGLPISLGLSENKTVSKVATGEAKPNNEKEVPYGSEKPFLAPLSIRKI 184

Query: 186 PGVGKVALEKLHQAGLYVGADVRRADYRKLLHQFGRLGASLWKKSHGIDEREVVTERERK 245
           P +G+     L+  G+     ++      L   FG+ G  LW K++GID+  VV   E K
Sbjct: 185 PMIGEKTAHSLYGMGVKKIQTLQTMPQELLESAFGKNGKLLWNKANGIDKSLVVPYSEAK 244

Query: 246 SVGVEYTFSQNISTFQECWQVIEQKLYPELDARLSRAHPQRGIIKQGIKVKFADFQQTTI 305
           S+  E TFSQ+ +   +  +     +  +L  +L + H  +      +K++++DF   T+
Sbjct: 245 SISTENTFSQD-TIDVKMLEATLVAMTEQLATKLRKNH--QLTCCASVKIRYSDFDTHTM 301

Query: 306 EHVHPALELDY-----FHELLEQVLTRQQGREIRLLGL 338
           +   P    D+       +L  ++  R+    IRL+G+
Sbjct: 302 QQRIPYTAADHTLLPVVKDLFRKLYNRRM--LIRLIGI 337