Pairwise Alignments

Query, 360 a.a., DNA polymerase IV from Vibrio cholerae E7946 ATCC 55056

Subject, 429 a.a., type VI secretion protein ImpB from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  113 bits (283), Expect = 8e-30
 Identities = 77/276 (27%), Positives = 138/276 (50%), Gaps = 5/276 (1%)

Query: 9   IHVDMDCFFAAVEMRDNPAYREIALAVGGHEKQRGVISTCNYQARKFGVRSAMPTAQALK 68
           + VD++ FFA+VE + NP +R   + V     +       +Y+++ +GV + M  ++A K
Sbjct: 10  LFVDLNAFFASVEQQMNPDWRGKPVIVRPAMSEYTGAIAASYESKAWGVHTGMRVSEARK 69

Query: 69  LCPQLHVVPGRMSVYKSVSQQIQTIFQRYTSLIEPLSLDEAYLDVSESTAYQGSATLIAQ 128
           LCP L V   R  +Y  + QQI     R+  + +  S+DE   ++      + +A  +A+
Sbjct: 70  LCPDLIVAEARPDLYVKIHQQIMAEIDRHVPVWKVGSIDECSCELLGPERLEANAVALAR 129

Query: 129 AIRRDIWQELN--LTASAGVAPIKFLAKVASDLNKPDGLYVVTPDKVQEMVDSLPLEKIP 186
            I+  I Q +   L +S G+AP +FLAK A  + KP GL V+  +++   +  LPL K P
Sbjct: 130 RIQAGILQNVGDCLRSSVGLAPSRFLAKTACGMQKPAGLTVLRANELPGPLLDLPLSKYP 189

Query: 187 GVGKVALEKLHQAGLYVGADVRRADYRKLLHQFGRL-GASLWKKSHGIDEREVVTERERK 245
           G+G     +L  AG+   A +     ++    +  + G  +W+  HG+D  E   E+   
Sbjct: 190 GIGSRMQVRLQAAGVTDTAGLWNMSAKQARAVWNSIEGERIWRGLHGLDS-EPTPEKPPA 248

Query: 246 SVGVEYTFSQNISTFQECWQVIEQKLYPELDARLSR 281
           S+   +  +Q + T  +  + + ++L  +  ARL R
Sbjct: 249 SISHSHVLAQAMRTPDKA-RAVARRLVVKCGARLRR 283