Pairwise Alignments

Query, 360 a.a., DNA polymerase IV from Vibrio cholerae E7946 ATCC 55056

Subject, 422 a.a., DNA polymerase IV from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  179 bits (454), Expect = 1e-49
 Identities = 120/339 (35%), Positives = 186/339 (54%), Gaps = 14/339 (4%)

Query: 8   IIHVDMDCFFAAVEMRDNPAYREIALAVGGHEKQRGVISTCNYQARKFGVRSAMPTAQAL 67
           I H+D D F+A+VE RD P  R+  + VGG +  RGV+ST  Y AR++GV SAMP  +AL
Sbjct: 44  IAHMDCDAFYASVEKRDRPELRDKPVIVGGGK--RGVVSTACYVARQYGVGSAMPMFKAL 101

Query: 68  KLCPQLHVVPGRMSVYKSVSQQIQTIFQRYTSLIEPLSLDEAYLDVSESTAYQGSATLIA 127
           K CP+  V+    + Y   SQ+I     + T LI+PLSLDEA++D+S +    G    + 
Sbjct: 102 KACPEAVVIRPDFTKYVFESQRILGALGQLTPLIQPLSLDEAWVDLSGTERLNGGPPAL- 160

Query: 128 QAIR--RDIWQELNLTASAGVAPIKFLAKVASDLNKPDGLYVVTPDKVQEMVDSLPLEKI 185
           Q IR  + I +E  LT S G+AP +FLAK+AS+++KP G  VV     Q ++   P+  +
Sbjct: 161 QLIRFQKQIEEETGLTVSIGLAPNRFLAKMASEMDKPRGFSVVGAANAQALLAPRPVTAL 220

Query: 186 PGVGKVALEKLHQAGLYVGADVRRADYRKLLHQFGRLGASLWKKSHGIDEREVVTERERK 245
           PGVG V  + L   G     D+ RAD R L+ ++G  G  L   +H  D R V  ER+RK
Sbjct: 221 PGVGPVFGKALRSDGYSTIGDLARADVRDLVKRYGESGLRLHDLAHARDARAVNPERDRK 280

Query: 246 SVGVEYTFSQNISTFQECWQVIEQKLYPELDARLSRAHPQRGIIKQ--GIKVKFADFQQT 303
            +  E TF++++++     + +E +L+P  +   S+A  + G+  +   +K++  DF+  
Sbjct: 281 GMSAETTFNEDLTSA----EALEAELWPLCEKLASKAR-RDGVASRVLVLKLRRTDFKIV 335

Query: 304 T--IEHVHPALELDYFHELLEQVLTRQQGREIRLLGLSV 340
           T  +    P             +L  + GR  RL+G+ +
Sbjct: 336 TRRVTLPDPVQTARALFAAGRDLLKPELGRPYRLIGIGM 374