Pairwise Alignments

Query, 360 a.a., DNA polymerase IV from Vibrio cholerae E7946 ATCC 55056

Subject, 357 a.a., DNA polymerase IV from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  245 bits (625), Expect = 1e-69
 Identities = 149/340 (43%), Positives = 206/340 (60%), Gaps = 10/340 (2%)

Query: 6   RKIIHVDMDCFFAAVEMRDNPAYREIALAVGGHEKQRGVISTCNYQARKFGVRSAMPTAQ 65
           RKI+HVDMD FFA+VE RD+P+ R   +AVG H   RGV++  +Y+AR+FGVRSAMP+  
Sbjct: 7   RKIVHVDMDAFFASVEQRDDPSLRGRPVAVG-HAAARGVVAAASYEARRFGVRSAMPSTT 65

Query: 66  ALKLCPQLHVVPGRMSVYKSVSQQIQTIFQRYTSLIEPLSLDEAYLDVSESTAYQGSATL 125
           A + CP L  VP R  VY++VS QI  IF  YT LIEPLSLDEAYLDV+      G+A+ 
Sbjct: 66  AQRKCPDLVFVPPRFDVYRAVSAQIHAIFADYTDLIEPLSLDEAYLDVTADRRILGTASA 125

Query: 126 IAQAIRRDIWQELNLTASAGVAPIKFLAKVASDLNKPDGLYVVTPDKVQEMVDSLPLEKI 185
            A+ IRR I +E  LTASAG++  KFLAK+ASD NKP+G +VV P + +  V+ LP+ + 
Sbjct: 126 TAEEIRRRILEETGLTASAGISYNKFLAKLASDQNKPNGQFVVAPGRGEAFVEDLPVRRF 185

Query: 186 PGVGKVALEKLHQAGLYVGADVRRADYRKLLHQFGRLGASLWKKSHGIDEREVVTERERK 245
            GVG V   K+ + G+  GAD+RR     L H FG+ G   +  + G D+R V  +R RK
Sbjct: 186 HGVGPVTAAKMEKLGIRTGADLRRQPLAFLQHHFGKSGPWYYAIARGEDDRPVNPDRTRK 245

Query: 246 SVGVEYTFSQNISTFQECWQVIEQKLYPELDARLSRAHPQRGIIKQGIKVKFADFQQTTI 305
           S G E TF+ ++ T  E  +     +  E+ A    A  +   +   +KVK+ADFQQ+T 
Sbjct: 246 SSGSETTFASDL-TEPEAIEAGVVAMADEVWAWCEIAGSRGRTVT--VKVKWADFQQSTR 302

Query: 306 EH--VHPALELDYFHELLEQVLTRQ---QGREIRLLGLSV 340
                 P    +   + L ++L R      R +RL+G+S+
Sbjct: 303 SRSLSEPVASREALRD-LSRLLVRSLYPPTRGVRLVGVSL 341