Pairwise Alignments

Query, 360 a.a., DNA polymerase IV from Vibrio cholerae E7946 ATCC 55056

Subject, 351 a.a., DNA polymerase IV from Acinetobacter radioresistens SK82

 Score =  252 bits (644), Expect = 9e-72
 Identities = 146/361 (40%), Positives = 217/361 (60%), Gaps = 21/361 (5%)

Query: 5   IRKIIHVDMDCFFAAVEMRDNPAYREIALAVGGHEKQRGVISTCNYQARKFGVRSAMPTA 64
           +RKIIH+DMD F+A+VE+R+ P    + + +  H   R V++  +Y AR FG+RSAM   
Sbjct: 1   MRKIIHIDMDAFYASVELRERPELVHLPVVIASHHP-RAVVAAASYPARSFGLRSAMSMT 59

Query: 65  QALKLCPQLHVVPGRMSVYKSVSQQIQTIFQRYTSLIEPLSLDEAYLDVSESTAYQGSAT 124
           QA KLCP ++V+    + Y+++S QI  IFQ+YT++IEP+SLDEAYLDV+E+     SAT
Sbjct: 60  QARKLCPDVYVIEPDFAKYRAISAQIHHIFQQYTAVIEPVSLDEAYLDVTENLKNLPSAT 119

Query: 125 LIAQAIRRDIWQELNLTASAGVAPIKFLAKVASDLNKPDGLYVVTPDKVQEMVDSLPLEK 184
            +A  IR DI++ L+LTASAGVAP KFLAK+ASD +KP+G+ V+ P +VQ  +  LPL+K
Sbjct: 120 AVAMQIREDIFKTLHLTASAGVAPNKFLAKIASDWHKPNGICVIKPHQVQAFIQDLPLKK 179

Query: 185 IPGVGKVALEKLHQAGLYVGADVRRADYRKLLHQFGRLGASLWKKSHGIDEREVVTERER 244
           IPGVGKV  +KL Q  L    D+++ +   L+  FG+ G  L+    GID R V   R+R
Sbjct: 180 IPGVGKVMQQKLQQLKLDNLGDLQQVEESLLIQHFGKYGRQLYLYGQGIDHRPVEANRQR 239

Query: 245 KSVGVEYTFSQNISTFQEC---WQVIEQKLYPELDARLSRAHPQRGIIKQGIKVKFADFQ 301
           + +  E TF +++S  QEC   W ++ +K++  L          + ++  GI +K     
Sbjct: 240 QQISKEITFDRDLS-LQECNSYWPILVEKVWQSL--------INKNLVACGISLKLRLKN 290

Query: 302 QTTIEH-------VHPALELDYFHELLEQVLTRQQGREIRLLGLSV-MLKPELQMKQLSM 353
             T++H       +   LE     ELL Q +   +    RL+G+ V  L+   Q  QLS+
Sbjct: 291 FQTLQHSKSFRLPLRSVLEFAQAVELLLQEMHIGENSLFRLVGVGVYQLQQAQQENQLSL 350

Query: 354 F 354
           +
Sbjct: 351 W 351