Pairwise Alignments

Query, 505 a.a., diguanylate cyclase from Vibrio cholerae E7946 ATCC 55056

Subject, 381 a.a., GGDEF family protein from Agrobacterium fabrum C58

 Score =  100 bits (250), Expect = 7e-26
 Identities = 82/280 (29%), Positives = 132/280 (47%), Gaps = 30/280 (10%)

Query: 246 INHHIKHPPFIRTE----EILALLFFSLVMYLVN---------LWVVIALIKPITTASQV 292
           ++ H+   P ++ E    +++  L  +  ++LV          L V IA +  + T  ++
Sbjct: 90  VSFHVFVTPDLKRELVIGDLVCALLLAFPVWLVRKRPVALADRLMVAIASLVVLETLVRI 149

Query: 293 -LQQFKTSGGKMPDASTFISSEMK----------EFATTINRIVGQLEDSQQVLRWQSEH 341
            +    T GG M + S F  S+             F   ++ +  Q+  +       +EH
Sbjct: 150 GMLLVMTPGGSMIELSEFFESDYAFYMQLAASIFGFLLALSVLASQISVTVDRHLHAAEH 209

Query: 342 DPLTRISNRRHLEKQLKSYLSDRPQAYLVLFLVDIDFFKRFNDSFGHLAGDEALCSVADV 401
           DPLT + NRR  ++++  + +D P   ++    DID FKR ND +GH AGD  L  ++D+
Sbjct: 210 DPLTDVLNRRGFDRRVPDFRNDTPDGAIIA--CDIDHFKRINDVYGHAAGDIVLIGLSDL 267

Query: 402 LQSVEFHGEKIVARFGGEEFCVVLASDCAFDAEQYAQQMRSKIEQLAIANPVDALCQYLT 461
           L+      + +VARFGGEEF V L    A  A Q A  MR+ +  L   N    +   +T
Sbjct: 268 LRR-NAPDDALVARFGGEEFVVFLPGQTAAAAGQLANGMRTGLSSLDWRN--RGVTSQIT 324

Query: 462 VSIGGVYAISPKMESYLSLFHQADMALYHAKEHGRDRYVV 501
            S  GV A++    S      +AD +LY AK  GRD+ V+
Sbjct: 325 ASF-GVSAVARGDHSIHDAIKRADDSLYAAKRGGRDQVVL 363