Pairwise Alignments

Query, 505 a.a., diguanylate cyclase from Vibrio cholerae E7946 ATCC 55056

Subject, 579 a.a., GGDEF family protein from Agrobacterium fabrum C58

 Score = 94.0 bits (232), Expect = 1e-23
 Identities = 80/252 (31%), Positives = 117/252 (46%), Gaps = 19/252 (7%)

Query: 262 LALLFFSLVMYLVNLWVV----IALIKPITTASQVLQQFKTSGGKMPDASTFISSEMKEF 317
           LA LF +L+  +V L +      AL +P+ +    +              T ++ E+ + 
Sbjct: 320 LASLFLALIAVMVLLRLTSVYKTALFQPMQSVLAQISAIAAGDLSEAQRQTGVAPEVTKM 379

Query: 318 ATTIN------RIVGQLEDSQQVLRWQ----SEHDPLTRISNRRHLEKQLKSYLS-DRPQ 366
              ++      R  G++E+ Q+ L  Q    SE D LT + NRR LEK +++ LS D   
Sbjct: 380 FQELDFLREQLRQKGEMEEQQRALSEQLRTLSETDALTGVFNRRALEKSVRAILSGDEDY 439

Query: 367 AYLVLFLVDIDFFKRFNDSFGHLAGDEALCSVADVLQSVEFHGEKIVARFGGEEFCVVLA 426
             L + ++DID FK  ND +GH  GD AL   A +L+        I+AR+GGEEF VVL 
Sbjct: 440 QSLGVMIIDIDHFKSINDRYGHAMGDLALQKTASLLKGA-LRKTDILARYGGEEFVVVLQ 498

Query: 427 SDCAFDAEQYAQQMRSKIEQLAIANPVDALCQYLTVSIGGVYAISPKMESYLSLFHQADM 486
                 A   A ++R  IE              LT S G V+  +  + S+  L   AD 
Sbjct: 499 DVSHATATATADRLRRLIEVQTFDEQTGL---SLTASFGVVWQEARAINSWDELIAIADD 555

Query: 487 ALYHAKEHGRDR 498
            LY AK  GR+R
Sbjct: 556 RLYEAKRAGRNR 567