Pairwise Alignments

Query, 505 a.a., diguanylate cyclase from Vibrio cholerae E7946 ATCC 55056

Subject, 356 a.a., GGDEF family protein from Agrobacterium fabrum C58

 Score =  101 bits (252), Expect = 4e-26
 Identities = 70/204 (34%), Positives = 112/204 (54%), Gaps = 10/204 (4%)

Query: 299 SGGKMPDAS-TFISSEMKEFATTINRIVGQLEDSQQVLRWQSEHDPLTRISNRRHLEKQL 357
           +G K+ D   TF  +++   A  ++++  +L++ +++    +  D LTR+SNRR  + +L
Sbjct: 141 TGSKIIDGEKTF--NDVNRHAEEMHQVRLELDEYKRI----ANTDSLTRLSNRRAFDDRL 194

Query: 358 KS-YLSDRPQAYLVLFLVDIDFFKRFNDSFGHLAGDEALCSVADVLQSVEFHGEKIVARF 416
            S Y S     Y  L L+DID FKR ND+FGH  GD+ L +VA V+++     +  VAR 
Sbjct: 195 ASVYDSSIGLQYTTLVLLDIDHFKRINDTFGHPVGDKILATVASVIRA-NVRKDGFVARS 253

Query: 417 GGEEFCVVLASDCAFDAEQYAQQMRSKIEQLAIANPVDALCQYLTVSIGGVYAISPKMES 476
           GGEEF ++L  +   +     +++R  +E     N       Y TV+I   +A + +  +
Sbjct: 254 GGEEFAIILDGNTPEEVMVMCERIRLSLESTPFRNSRSG-ADYGTVTISIGFASAARASN 312

Query: 477 YLSLFHQADMALYHAKEHGRDRYV 500
              L+  AD ALYHAKE GR+R V
Sbjct: 313 PSELYGHADTALYHAKETGRNRSV 336