Pairwise Alignments

Query, 451 a.a., sodium-dependent transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 486 a.a., sodium-dependent transporter from Vibrio cholerae E7946 ATCC 55056

 Score =  196 bits (499), Expect = 1e-54
 Identities = 132/455 (29%), Positives = 230/455 (50%), Gaps = 29/455 (6%)

Query: 7   RETFSSRLGFILAAAGAAVGLGNIWGFPTQAASNGGGAFLLVYLILIFVVAFPMLVVEMA 66
           RE + SR+GF+LAA G+A+GLGNIW FP  A  NGGGAF + YL  +     P +++E +
Sbjct: 3   REQWGSRVGFVLAAVGSAIGLGNIWRFPYMAYENGGGAFFIPYLFAMVTAGIPFMILEFS 62

Query: 67  IGRYGQANPVDSMRSLTSQPAAKKVGGFVGWVGLSVPSAVLAFYSIVGGWIICFLLGAMT 126
           +G+  + +   ++  + S+        ++GW  + + + +  +Y  V GW I +   + T
Sbjct: 63  MGQKHRGSAPTTLAKIHSKFE------WLGWFQVGIAAVIAVYYVAVIGWAISYFGMSFT 116

Query: 127 DLFGFTAA----SAWLK-GFSVERNL--------FGTLIFYVLTILIVQGGVKQGIERWS 173
             +G        S +LK G +   NL        F  LI +V+T   + GGVK+GIER S
Sbjct: 117 QSWGSDTNAYFFSEYLKLGDNSPTNLGSIQWHIAFAMLIAWVITYAAIVGGVKKGIERAS 176

Query: 174 TRLMPALFVLFAVLFIYIMTQQGAWEGLKHYLIPDFEKVWDRKLILAAMGQGFFSLTIGG 233
             +MP LF++  +L   ++   GA +G+ +   PDF K+WD K+  AA GQ FF+L+IG 
Sbjct: 177 KIMMPILFIMVLILIARMIFLPGALDGVNYMFQPDFSKIWDVKVWAAAYGQIFFTLSIGF 236

Query: 234 CSMLIYGSYLSKKENLPKMAMSVTLVDTAVAFIAGLVVLPAM-FVAMNKGVQIYAQDGSL 292
             ML Y SYL +K ++   A    L++   + +AG+++   + ++A  +G  +      +
Sbjct: 237 AIMLAYSSYLPEKSDITNNAFMTVLINCGFSVLAGIMIFSVLGYMAQEQGKPL----TEV 292

Query: 293 LSSDT-LVFTVLPLMFDSLGLLGQIFAMVFFLLLTIAALTSSISMLECPVALVGERFNTR 351
           +S+   L F  LP   + L  +  I   +FFL L +A L+S IS++E   + + ++    
Sbjct: 293 VSAGVGLAFVTLPAAINLLP-IPYILGPLFFLALVVAGLSSHISIMEAVTSALIDKLGWS 351

Query: 352 RTPTSWVLGGLIALFSVVIVYNFGALFGLVATLATQYLQPTAALMFCLFGGWVWQRDAKM 411
           R   + ++ G+  L S+    N G    L+  L   +      +  CL    +     K+
Sbjct: 352 RKKAANIVIGIGFLVSMAFATNGGL---LLLDLVDHFANNVGIMASCLVELVLMTWLLKI 408

Query: 412 KELQAGFPELQQSLFGKIWPWYVKFVCPVLVATVI 446
            +++     +     G  +   ++FV PV++A ++
Sbjct: 409 SDVRKYVNSISDFSVGVWFDICLRFVSPVILAIIV 443