Pairwise Alignments

Query, 451 a.a., sodium-dependent transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 473 a.a., Na+-dependent transporters of the SNF family protein from Alteromonas macleodii MIT1002

 Score =  262 bits (669), Expect = 2e-74
 Identities = 159/464 (34%), Positives = 258/464 (55%), Gaps = 30/464 (6%)

Query: 4   SNSRETFSSRLGFILAAAGAAVGLGNIWGFPTQAASNGGGAFLLVYLILIFVVAFPMLVV 63
           S +RE F SR+GFILAAAG+AVG+GN+ GFP  AA NGGGAFLL+Y I +F +  P+++ 
Sbjct: 2   SGAREQFGSRIGFILAAAGSAVGIGNLVGFPVGAAKNGGGAFLLMYAIFVFAICLPVMLA 61

Query: 64  EMAIGRYGQANPVDSMRSLTSQPAAKKVGGFVGWVGLSVPSAVLAFYSIVGGWIICFLLG 123
           EM++GR+ + +P+ +   ++      KV    GW+ ++ P  +  FY ++  W+  +L  
Sbjct: 62  EMSVGRHAKKDPLGAYSDISGNEKKWKV---AGWLAIATPFMIAVFYMVITVWLFGYLFE 118

Query: 124 AMTDLFGFTAASAWLKGFSVERNLFGTLIFYV-LTILIVQGGVKQGIERWSTRLMPALFV 182
           A++      A       F     +F  +   V +  LI+QGGVK+GIE+ +  LMPALFV
Sbjct: 119 AVSGNLDKLANPETFGLFINSEAIFLYMAAVVGVVYLILQGGVKEGIEKAAKLLMPALFV 178

Query: 183 LFAVLFIYIMTQQGAWEGLKHYLIPDFEKVWDRKLILAAMGQGFFSLTIGGCSMLIYGSY 242
           +   L I+++T++ A  G++ Y++P+F K+   +++  A+ Q FFSL++G   ++ YGSY
Sbjct: 179 MLIGLVIFVLTRENAMAGVEFYIVPEFSKI-TAEVVNGALSQAFFSLSLGMGILITYGSY 237

Query: 243 LSKKENLPKMAMSVTLVDTAVAFIAGLVVLPAMFVAMNKGVQIYAQDGSLLSSDTLVFTV 302
           + K+ ++P  A  V L DTAVAF AGL++LPA+F + N  +     D    SS  ++FT 
Sbjct: 238 IDKRADVPSAAKLVALTDTAVAFTAGLMILPAIF-SFNPDIN---PDDLSESSVGMIFTY 293

Query: 303 LPLMF----DSLGLLG-QIFAMVFFLLLTIAALTSSISMLECPVALVGERFNTRRTPTSW 357
           LP +F    DS+G +G  I A +FFLL+  AA+TS +S+ E PVA + +     R     
Sbjct: 294 LPSIFLALQDSIGYMGASIVASLFFLLVFFAAITSLVSIFEVPVAALMDEKGVSRKWALG 353

Query: 358 VLGGLIALFSVVIVYNFG----------------ALFGLVATLATQYLQPTAALMFCLFG 401
            LG ++ L +++   +FG                +LF ++  +    + P   L+ CLF 
Sbjct: 354 SLGSIMILLAILSALSFGKVDMLTSFMHYAGADKSLFDVIYDVFYDTILPLNGLLICLFV 413

Query: 402 GWVWQRDAKMKELQAGFPELQQSLFGKIWPWYVKFVCPVLVATV 445
            + W+       L+ G    + S F K     +K   P+++  +
Sbjct: 414 IYRWKSANFNASLEEGSSGYKGSWFEKYVDISLKTFIPLILLVI 457