Pairwise Alignments

Query, 301 a.a., 30S ribosomal protein S6--L-glutamate ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 294 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score = 86.7 bits (213), Expect = 6e-22
 Identities = 80/279 (28%), Positives = 127/279 (45%), Gaps = 19/279 (6%)

Query: 13  YSTKRLIEACKQRGHEVRVIDALRCYMNINSDKPEIHYKG--EEL--AGFDAVIPRIGAS 68
           + T+ L+ A K RG + R++    C   +      +   G  ++L  A F   +P     
Sbjct: 9   WHTRSLVAALKARGVKPRIVSLRACGFAVGETAHGLLLPGFGDDLPDACFVRSVPAGTLE 68

Query: 69  VTFYGTAVLRQFEMMGVYPANESVAITRSRDKLRSMQLLSRRGIGMPITGFASKPDDVKD 128
              +   VL     +GV   N++ AI R  DK  +  LL+  G+  P T    +    + 
Sbjct: 69  QITHRLGVLHALAALGVRVMNDARAIERCVDKSATTFLLAHAGLPTPRTLVLEEAATARM 128

Query: 129 LLDMVGGAPVVIKLLEGTQGIGVVLAETRTAAESVIEAFMGLKANIMVQEYIK------- 181
           L+D   G  V +K L G QG G+     R A +  +     +     +Q+++        
Sbjct: 129 LVDSAPGDSV-LKPLFGAQGRGL----ERIAPKGALPEPEAVGGVYYLQDFVAAPAQSGP 183

Query: 182 EAGGADIRCFVIGDKVIAAMKRQGADGEFRSNLHRGGTASLVKITPQERKTAIEAAKIMG 241
           +A   D R FV+G +  AAM R+     + +N+H+G T + V         A+ AA  +G
Sbjct: 184 DAIHEDFRVFVVGSRAEAAMARRAKG--WITNIHQGATGAEVAAEGLLADYAVRAAAAVG 241

Query: 242 LNVAGVDLLRSARGPL-VMEVNSSPGLEGIEAATGKDIA 279
              AGVDL+R A G L V+EVNS P   G+  ATG+++A
Sbjct: 242 ATYAGVDLIRDAEGRLKVLEVNSMPAWHGLFDATGRNMA 280