Pairwise Alignments

Query, 301 a.a., 30S ribosomal protein S6--L-glutamate ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 528 a.a., RimK family protein from Pseudomonas fluorescens SBW25

 Score = 64.7 bits (156), Expect = 4e-15
 Identities = 63/253 (24%), Positives = 118/253 (46%), Gaps = 16/253 (6%)

Query: 55  LAGFDAVIPRIGASVTFYGTAVLRQFEMMGVYPANESVAITRSRDKLRSMQLLSRRGIGM 114
           LA +DA++ R   SV  +     ++ E  G+   ++  +I R  +K+    LL+   +GM
Sbjct: 274 LAEYDALLIRETTSVDNHTYRFAKKAESEGLVVMDDPASILRCTNKVYLTDLLNSHQLGM 333

Query: 115 PITG--FASKPDDVKDLLDMVGGAPVVIKLLEGTQGIGVVLAETRTAAESVIEAFMGLKA 172
           P T   +  +P D + + + +G  P+V+K+ +G    GV+  E++ A             
Sbjct: 334 PATEILYKERPQDFERVGERLG-FPLVLKIPDGCFSRGVIKVESQAALLKATAELFEHSV 392

Query: 173 NIMVQEYIKEAGGADIRCFVIGDKVIAAMKRQGADGEFRSNLHRG---------GTASLV 223
            ++ QE+       D R  V+  K I A +   + G ++   H+           T ++ 
Sbjct: 393 LLLAQEFFYTE--YDWRIGVLNRKPIFACQYFMSKGHWQIYNHKAIGQAINGECRTLAVH 450

Query: 224 KITPQERKTAIEAAKIMGLNVAGVDLLRSARGPLVMEVNSSPGLE-GIE-AATGKDIAGM 281
           +      + A++ A ++G  + GVDL +S    +V+EVN +P L+ GIE A    D+ G+
Sbjct: 451 EAPKAVVELAVKTANLIGDGLYGVDLKQSGDKVVVIEVNDNPNLDAGIEDAYLQDDLYGL 510

Query: 282 IVEFIEKNAASKR 294
           ++E   +    KR
Sbjct: 511 VLEEFVRRLELKR 523