Pairwise Alignments

Query, 430 a.a., NCS2 family permease from Vibrio cholerae E7946 ATCC 55056

Subject, 449 a.a., predicted permease (NCBI) from Escherichia coli BW25113

 Score =  303 bits (776), Expect = 7e-87
 Identities = 169/432 (39%), Positives = 248/432 (57%), Gaps = 7/432 (1%)

Query: 2   LEKLFKLSEYGTNVRTEILAGVTTFLTMAYIIFVNPAILSDAGMDRGAVFVATCLAAAIG 61
           L+  FK+S+ G+ VR E++AG+TTFL M Y + V P +L  AG    AVFVATCL A +G
Sbjct: 12  LDAWFKISQRGSTVRQEVVAGLTTFLAMVYSVIVVPGMLGKAGFPPAAVFVATCLVAGLG 71

Query: 62  CFIMGFIANYPIAQAPGMGLNAFFTYGVVLGMGHTWQVALAAVFCSGVLFILLSLFKIRE 121
             +MG  AN P+A    + L AF  + +VLG   +  VAL AVF  GVLF ++S   IR 
Sbjct: 72  SIVMGLWANLPLAIGCAISLTAFTAFSLVLGQHISVPVALGAVFLMGVLFTVISATGIRS 131

Query: 122 WIINSIPHSLRTGISAGIGLFLAFIALKNAGIVVDNP--ATLVSLGAITSLHAVLAAVGF 179
           WI+ ++PH +  G   GIGLFL  IA    G+V+ NP     V+LG   +   +++ VG 
Sbjct: 132 WILRNLPHGVAHGTGIGIGLFLLLIAANGVGLVIKNPLDGLPVALGDFATFPVIMSLVGL 191

Query: 180 FLTIGLVYRGVKGAVMIAILAVTALGLVFG-DVQWGGIMSTPPSIAPT----FMQLDFSA 234
            + IGL    V G +++ I+ ++ +GL+F  +V + G+ + P             LD   
Sbjct: 192 AVIIGLEKLKVPGGILLTIIGISIVGLIFDPNVHFSGVFAMPSLSDENGNSLIGSLDIMG 251

Query: 235 VFEIGMISVVFAFLFVDLFDTAGTLVGVATKAGLIEKDGKIPRLNRALLADSTATSVGAL 294
                ++  V A +   +FD  GT+  VA +A L++KDG+I    +AL  DS ++    L
Sbjct: 252 ALNPVVLPSVLALVMTAVFDATGTIRAVAGQANLLDKDGQIIDGGKALTTDSMSSVFSGL 311

Query: 295 LGTSNTTSYIESVSGVAVGGRTGLTAVVVGILFLLALFFSPLAGMIPAYATAGALFYVAI 354
           +G +    YIES +G A GG+TGLTA+ VG+LFLL LF SPL+ ++P YATA AL YV +
Sbjct: 312 VGAAPAAVYIESAAGTAAGGKTGLTAITVGVLFLLILFLSPLSYLVPGYATAPALMYVGL 371

Query: 355 LMMSGLVSIDWRDLTEAAPTVVTCLMMPLTFSIAEGISLGFIAYAAIKLFSGKGRSVSLS 414
           LM+S +  ID+ D  +A   +VT + + LT +I  GI +GF      +L SG+ R +++ 
Sbjct: 372 LMLSNVAKIDFADFVDAMAGLVTAVFIVLTCNIVTGIMIGFATLVIGRLVSGEWRKLNIG 431

Query: 415 VWVMAAIFVIKY 426
             V+A   V  Y
Sbjct: 432 TVVIAVALVTFY 443