Pairwise Alignments

Query, 129 a.a., sigma factor-binding protein Crl from Vibrio cholerae E7946 ATCC 55056

Subject, 133 a.a., DNA-binding transcriptional regulator (NCBI) from Escherichia coli BW25113

 Score =  105 bits (263), Expect = 2e-28
 Identities = 47/101 (46%), Positives = 63/101 (62%), Gaps = 1/101 (0%)

Query: 12  RLLSTLKAMGPYLREGQCSERFYLFDCLASCVNDKKSPEKREFWGWWMELTQNEQEMSAC 71
           RL+    A+GPY+REG+C +  + FDCLA CVN K +PE REFWGWWMEL   E   +  
Sbjct: 11  RLIKKFTALGPYIREGKCKDNRFFFDCLAVCVNVKPAPEVREFWGWWMELEAQESRFTYS 70

Query: 72  YHIGRYTLAGDWVAEAIPESAQAE-VNHTQAEFHKKLVKTL 111
           Y  G +  AGDW +  + ++   E + HT  EFH+KL + L
Sbjct: 71  YQFGLFDKAGDWKSVPVKDTEVVERLEHTLREFHEKLRELL 111