Pairwise Alignments

Query, 156 a.a., N utilization substance protein B from Vibrio cholerae E7946 ATCC 55056

Subject, 166 a.a., transcription antitermination protein from Pseudomonas putida KT2440

 Score =  126 bits (317), Expect = 1e-34
 Identities = 67/153 (43%), Positives = 94/153 (61%), Gaps = 14/153 (9%)

Query: 2   GASVKPAARRNARQFALQAIYSWQITKENVATIEEQFLTSGKYDEEEHRAAEPALAAPET 61
           G   K A RR AR+ A QA+Y W + + ++  IE QF     + +               
Sbjct: 20  GKPSKSAKRREARKLATQALYQWHMAQHSLNEIEAQFRVDNDFTD--------------V 65

Query: 62  DVSYFRDLLAGVVLNHNELDSKLRPFVSRPMQDLDMMELALLRLAMYEMTRREDVPYKVV 121
           D +YFR++L GV     E+D  L P ++  +++LD +ELA+LRL+ +E+ +R DVPY+VV
Sbjct: 66  DGAYFREILHGVPAIKGEIDKALVPCMTIALEELDPVELAVLRLSTWELIKRVDVPYRVV 125

Query: 122 INEAIELAKVFAAEDSHKFVNGVLDKAAPHVRK 154
           INE +ELAKVF A D HKFVNGVLDK AP +R+
Sbjct: 126 INEGVELAKVFGATDGHKFVNGVLDKLAPALRE 158