Pairwise Alignments

Query, 156 a.a., N utilization substance protein B from Vibrio cholerae E7946 ATCC 55056

Subject, 166 a.a., Transcription antitermination protein NusB from Pseudomonas sp. DMC3

 Score =  129 bits (325), Expect = 2e-35
 Identities = 68/153 (44%), Positives = 95/153 (62%), Gaps = 14/153 (9%)

Query: 2   GASVKPAARRNARQFALQAIYSWQITKENVATIEEQFLTSGKYDEEEHRAAEPALAAPET 61
           G   K A RR ARQ A QA+Y W + ++++  IE QF     + +               
Sbjct: 20  GKPSKSAKRREARQLATQALYQWHMARQSLNEIEAQFRVDNDFTD--------------V 65

Query: 62  DVSYFRDLLAGVVLNHNELDSKLRPFVSRPMQDLDMMELALLRLAMYEMTRREDVPYKVV 121
           D +YFR++L GV     E+D+ L P +   +++LD +ELA+LRL+ +E+ +R DVPY+VV
Sbjct: 66  DGAYFREILHGVPQFKTEIDTALTPCLDLAIEELDPVELAVLRLSTWELLKRVDVPYRVV 125

Query: 122 INEAIELAKVFAAEDSHKFVNGVLDKAAPHVRK 154
           INE IELAKVF + D HKFVNGVLDK AP +R+
Sbjct: 126 INEGIELAKVFGSTDGHKFVNGVLDKLAPRLRE 158