Pairwise Alignments

Query, 156 a.a., N utilization substance protein B from Vibrio cholerae E7946 ATCC 55056

Subject, 394 a.a., transcription antitermination factor NusB from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 48.1 bits (113), Expect = 2e-10
 Identities = 35/133 (26%), Positives = 65/133 (48%), Gaps = 10/133 (7%)

Query: 23  SWQITKENVATIEEQFLTSGKYDEEEHRAAEPALAAP-ETDVSYFRDLLAGVVLNHNELD 81
           SW   K  V ++  + L +    E +   + P +A   E D  +F+++    + N    D
Sbjct: 246 SWTENKAVVRSLAIKVLKNVLEAENQEEYSLPEIAINWEEDKEFFQNIFNLTIEN----D 301

Query: 82  SKLRPFVSRPMQDLDMMELA-----LLRLAMYEMTRREDVPYKVVINEAIELAKVFAAED 136
              R  ++   ++ D+  +A     ++ +A+ EM     +P KV INE I+++K ++   
Sbjct: 302 EANRALIAEKTKNWDIERIASTDKIIISMAVTEMLFFPSIPVKVTINEYIDISKTYSTPK 361

Query: 137 SHKFVNGVLDKAA 149
           S +FVNG+LD  A
Sbjct: 362 SKQFVNGLLDVLA 374