Pairwise Alignments

Query, 156 a.a., N utilization substance protein B from Vibrio cholerae E7946 ATCC 55056

Subject, 174 a.a., transcription antitermination factor NusB from Brevundimonas sp. GW460-12-10-14-LB2

 Score = 72.0 bits (175), Expect = 5e-18
 Identities = 45/154 (29%), Positives = 85/154 (55%), Gaps = 8/154 (5%)

Query: 3   ASVKPAARRNARQFALQAIYSWQITKENVATIEEQFLTSGKYDEEEHRAAEPALAAPETD 62
           +S +  AR  +R  A+QA+Y  ++  E V T+  +F ++ ++D +    A       E D
Sbjct: 27  SSKQRRARTVSRLAAVQALYQMELAGEGVETVITEF-SNFRFDTDIEGEA-----LAEAD 80

Query: 63  VSYFRDLLAGVVLNHNELDSKLRPFVSR--PMQDLDMMELALLRLAMYEMTRREDVPYKV 120
            +YF D++ GV+ +  ++D+ ++  ++    ++ +D    ALLR   +E+ +  + P +V
Sbjct: 81  EAYFADIVRGVIESQRDIDAAIKARLASNWKLERIDATLRALLRSGAWELIKHPETPREV 140

Query: 121 VINEAIELAKVFAAEDSHKFVNGVLDKAAPHVRK 154
           VI+E +ELAK F  +   +FVN  LD  +  +RK
Sbjct: 141 VIDEYVELAKAFFDDAEARFVNAALDGVSRDMRK 174