Pairwise Alignments

Query, 881 a.a., bifunctional uridylyltransferase/uridylyl-removing protein GlnD from Vibrio cholerae E7946 ATCC 55056

Subject, 900 a.a., protein-PII uridylyltransferase from Pseudomonas simiae WCS417

 Score =  692 bits (1787), Expect = 0.0
 Identities = 372/887 (41%), Positives = 540/887 (60%), Gaps = 19/887 (2%)

Query: 6   MPYQSPITFQEPQLTVE---------SLKQQLESFTEYQKQEFFDHHPVTDLVLGRSEYM 56
           MP   P  F   Q   E         + K+ +    E   Q F     +  L+  R+ ++
Sbjct: 1   MPQVDPELFDRGQFQAELALKASPIAAFKKAIRQAREVLDQRFRSGRDIRRLIEDRAWFV 60

Query: 57  DLLLHRLWQFFGFDELVEVSLVAVGGYGRGELHPLSDIDLLVLSQQPLSEQVANKISQFL 116
           D +L + W+ F + E  +++LVAVGGYGRGELHP SDIDLL+L      E   + I +FL
Sbjct: 61  DNILQKAWEQFSWSEDADIALVAVGGYGRGELHPYSDIDLLILLDSADHEIFRDSIERFL 120

Query: 117 TLLWDLKLEIGHAVRTVEQCAEIGKADLTVATNLQEARLLCGCEETFHRLKMVIHSESFW 176
           TLLWD+ LE+G +VR+V++CAE  +ADLTV TNL E+R + G E    R+  V  +   W
Sbjct: 121 TLLWDIGLEVGQSVRSVDECAEEARADLTVITNLMESRTIAGPERLRQRMLEVTSTAHMW 180

Query: 177 PSEIFYQAKVREQKERHARYHDTTYNLEPDIKSTPGGLRDIHTLSWVARRHFGATSLYEM 236
           PS+ F+ AK  EQK RH +Y+DT YNLEP++K +PGGLRDI T+ WVARR +G  +L  +
Sbjct: 181 PSKDFFLAKRAEQKARHHKYNDTEYNLEPNVKGSPGGLRDIQTILWVARRQYGTLNLRAL 240

Query: 237 SRFGFLTDAEYRELVECQDFLWRVRFALHIELKRYDNRLTFAHQVQVARHLGYFGEGNR- 295
           +  GFL ++E   L   Q+FLW+VR+ALH+   R ++RL F HQ  +A  LG+ GE  + 
Sbjct: 241 AGEGFLVESENALLASSQEFLWKVRYALHMLAGRSEDRLLFDHQRSIATLLGFEGEDAKT 300

Query: 296 GIEMMMKEFFRTLRRVAELNKMLLKIFDKAILNNGEEAEAVIIDDDFQRRGNMIEARKPA 355
            IE  M++++R +  +A+L+ ++++ F++ IL   +EA    I+  FQ     IEAR   
Sbjct: 301 SIESFMQQYYRVVMSIAQLSDLIIQHFEEVILAPEDEAPPQPINARFQLHDGYIEARNDN 360

Query: 356 LFQARPETILDMFLHMASDSTIESVAPATMRQLRTARRRLNKFLHTLPAAREKFIELVRH 415
           +F+  P  +L++F+ MA    I+ V   T+R LR  R  ++            FIEL + 
Sbjct: 361 VFRRTPFAMLEIFVLMAQQPEIKGVRADTIRLLRENRHLIDDDFRNDIRNTSLFIELFKC 420

Query: 416 PNALHKAFSQMHKLGVLAAYLPQWNQIVGQMQFDLFHVYTVDEHSIRLLKHIHLFSDANN 475
              +H+   +M++ G+L  YLP++  IVGQMQ DLFH+YTVD H++ L+KH+        
Sbjct: 421 KIGIHRNLRRMNRYGILGRYLPEFGFIVGQMQHDLFHIYTVDAHTLNLIKHLRKLQYTQV 480

Query: 476 HDRHPICCEIYPKIQKKELLILAAIFHDIGKGRGGDHSEIGADEAFDFCIEHGLSKPEAK 535
            ++ P+  ++  K+ K EL+ LA ++HDIGKGR GDHSE+GA +A  FC  H L   +++
Sbjct: 481 SEKFPLASKLMAKLPKPELIYLAGLYHDIGKGRHGDHSEVGAVDAEAFCQRHQLPVWDSR 540

Query: 536 LVAWLVKNHLLMSVTAQRRDIYDPDVIIEFAKKVRDEERLEYLVCLTVADICATNPELWN 595
           L+ WLV+NHL+MS TAQR+D+ DP VI +FA+ V DE RL+YL  LTV+DI ATNP LWN
Sbjct: 541 LIVWLVQNHLVMSTTAQRKDLSDPQVIHDFAQTVGDETRLDYLYVLTVSDINATNPTLWN 600

Query: 596 SWKRTLLAELFYSTQRALRRGLENPVDVRERIRHNQQMASALLRKEGFSSREIEVLWQRF 655
           SW+ +LL +L+  T+RALRRGLENPVD  E+IR  Q  A  +L + G    ++E LW + 
Sbjct: 601 SWRASLLRQLYTETKRALRRGLENPVDREEQIRRTQSAALDILVRGGNDPDDVEQLWSQL 660

Query: 656 KADYFLRHTHKQIAWHCTHLLRHEDSSKPLVLLSKKATR---GGTEVFIYTKDQAALFAT 712
             DYFLRHT   +AWH   +L+      PLVL+ +   R   GGT++FIY  DQ   FA 
Sbjct: 661 GDDYFLRHTAGDVAWHTDAILQQPADGGPLVLIKETTQREFEGGTQIFIYAPDQHDFFAV 720

Query: 713 VVAELDRRNLNVHDAQIMASKDGYVLDTFMVLDQNGQAIEED--RHQALIRHLVHVLE-- 768
            VA +D+ NLN+HDA+++ S   + LDT++VLD +G +I ++  R + +   L   L   
Sbjct: 721 TVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTDGDSIGDNPARVKKIREGLTEALRNP 780

Query: 769 DGRPTTQKARRIPRNLQHFKVKTQVDFLPTKSKKRTLMEFVALDTPGLLATVGATFAELN 828
           D  PT  + RR+PR L+HF    QV       +  T++E  A D PGLLA +G  F E +
Sbjct: 781 DEYPTIIQ-RRVPRQLKHFAFAPQVTISNDAQRPVTVLELSAPDRPGLLARIGGIFLEFD 839

Query: 829 LDLHAAKITTIGERAEDLFILTNAQGTRLNEEEE-QHLREKLIEHVA 874
           L L  AKI T+GER ED+F +T+A    L++ E    L+E +++ ++
Sbjct: 840 LSLQNAKIATLGERVEDVFFITDADNQPLSDPELCLRLQEAIVQQLS 886