Pairwise Alignments

Query, 242 a.a., 30S ribosomal protein S2 from Vibrio cholerae E7946 ATCC 55056

Subject, 251 a.a., SSU ribosomal protein S2p (SAe) from Variovorax sp. SCN45

 Score =  266 bits (681), Expect = 2e-76
 Identities = 138/246 (56%), Positives = 174/246 (70%), Gaps = 7/246 (2%)

Query: 3   SVSMRDMLTAGVHFGHQTRYWNPKMKQFIFGARNRVHIINLEKTVPMFNEALAELAKVGE 62
           S +MR+ML AGVHFGHQTR+WNPKM  FIFG RN++HIINLEK++PMF +A+    ++  
Sbjct: 2   STTMREMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKSLPMFQDAMKYAKQLTA 61

Query: 63  KKGKVLFVGTKRAASESVKEAALASNQYYVNNRWLGGMLTNWKTVRQSIKRLKELEVQST 122
            +G +L VGTKR A E V   A  +   +V+ RWLGGMLTN+KTV+ SIKRLK+++ Q  
Sbjct: 62  NRGTILMVGTKRQAREIVAAEARRAGVPFVDTRWLGGMLTNFKTVKTSIKRLKDMKAQQE 121

Query: 123 DGTFDKLTKKEALMRTREMEKLEKSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIP 182
            G  D L+KKE L  +RE+EKLEK +GGI+DM  LPDA+FVID     IA+ EA  LGIP
Sbjct: 122 AG-LDSLSKKEQLTFSREIEKLEKDIGGIQDMTALPDAIFVIDVGFHKIAVAEAKKLGIP 180

Query: 183 VFAVVDTNSSPDGVDYIIPGNDDAIRAVQLYLNAAAQAINEGRNKD----VAAVAE--KD 236
           +  VVD+N SP+G+DY+IPGNDD+ +AV LY    A AI EGRN      V A+AE   D
Sbjct: 181 LIGVVDSNHSPEGIDYVIPGNDDSSKAVTLYARGIADAIIEGRNSATGDVVKAIAEGGSD 240

Query: 237 GFVEAE 242
            FVE E
Sbjct: 241 EFVEVE 246