Pairwise Alignments

Query, 242 a.a., 30S ribosomal protein S2 from Vibrio cholerae E7946 ATCC 55056

Subject, 249 a.a., SSU ribosomal protein S2p (SAe) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  270 bits (690), Expect = 2e-77
 Identities = 135/244 (55%), Positives = 173/244 (70%), Gaps = 5/244 (2%)

Query: 3   SVSMRDMLTAGVHFGHQTRYWNPKMKQFIFGARNRVHIINLEKTVPMFNEALAELAKVGE 62
           S+SMR+ML AGVHFGHQTR+WNPKM  +IFG RN++HI+NLEKT+P+F EA   + ++  
Sbjct: 2   SISMREMLEAGVHFGHQTRFWNPKMAPYIFGHRNKIHIVNLEKTLPLFEEAAKFVRQLSA 61

Query: 63  KKGKVLFVGTKRAASESVKEAALASNQYYVNNRWLGGMLTNWKTVRQSIKRLKELEVQST 122
            +G +L VGTKR + + V + A  +   +V+ RWLGGMLTN+KTV+ SIKRLK+++ Q  
Sbjct: 62  NRGTILMVGTKRQSRDIVAQEARRAGVPFVDQRWLGGMLTNFKTVKTSIKRLKDMQAQKE 121

Query: 123 DGTFDKLTKKEALMRTREMEKLEKSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIP 182
            G  D +TKKE LM  REMEKLEK +GGI+DM  LPDA+F+ID     IA+ EA  LGIP
Sbjct: 122 AG-LDSMTKKEQLMFAREMEKLEKDIGGIQDMNALPDAIFIIDVGFHKIAVLEAQKLGIP 180

Query: 183 VFAVVDTNSSPDGVDYIIPGNDDAIRAVQLYLNAAAQAINEGRN----KDVAAVAEKDGF 238
           +  VVDTN SP G+DY+IPGNDD+ RAV LY    A AI EGR+    + V A    D F
Sbjct: 181 LVGVVDTNHSPVGIDYVIPGNDDSARAVALYARGIADAIIEGRSNAVTESVKAAPAADEF 240

Query: 239 VEAE 242
           VE +
Sbjct: 241 VEVK 244