Pairwise Alignments

Query, 452 a.a., zinc metalloprotease from Vibrio cholerae E7946 ATCC 55056

Subject, 377 a.a., Intramembrane protease RasP/YluC, implicated in cell division based on FtsL cleavage from Sphingobium sp. HT1-2

 Score =  144 bits (362), Expect = 6e-39
 Identities = 85/237 (35%), Positives = 131/237 (55%), Gaps = 18/237 (7%)

Query: 220 TPEISNQLTNVSAQGAGERAGLQVGDTVLQINGQAVEAWQQVVNAIQSHPNAPIAVMVER 279
           TP ++     V    A   AG+Q GD ++ +NG+A+  +  +    Q  P  P+ ++++R
Sbjct: 140 TPAVAGM---VQPGSAAAMAGIQPGDRIVSLNGRAMSTFDDIRLYAQIRPGEPVTILLDR 196

Query: 280 AGQQVE----LTLIPDSRELSQGKVIGFAGIAP--KVAEWPQNYRFELQFGVFESLGKAV 333
            GQ +E    +  + +         IG  GIAP   V E            +  +   A+
Sbjct: 197 KGQVIEKQGHVGAVSEDDGFGNKFRIGRLGIAPGEPVIE---------PVSLLRAPVVAI 247

Query: 334 EKSGQVIDLTVSMLKKLLVGDVGLNNLSGPISIAKGAGTTADYGFVYFLGFLALISINLG 393
           E++GQ+I   V  L +++ GD  +  L GP+ IA+ +G  A  G   F+ F+ALISINLG
Sbjct: 248 ERTGQIIRTMVETLGQVIGGDRSVKELGGPLKIAQVSGQAATLGLESFIFFIALISINLG 307

Query: 394 IINLVPLPMLDGGHLLFFMIEAVIRRPVPEKVQEMGYRIGGAIIFSLMAVAIFNDFT 450
            INL+P+PMLDGGHLLF+ +EAV RRPV  +VQ+  YR G A++ ++M +  FND +
Sbjct: 308 FINLLPIPMLDGGHLLFYGVEAVQRRPVSPQVQDWAYRSGLALLMTVMLLVTFNDLS 364



 Score =  119 bits (297), Expect = 2e-31
 Identities = 68/162 (41%), Positives = 93/162 (57%), Gaps = 10/162 (6%)

Query: 5   LWNFIAFIIALGILVAVHEFGHFWVARRCGVKVEKFSIGFGKSIWKRVGHDGTEYSISMI 64
           L   +AF+  +G LV VHE GH+ V R CGVK E FSIGFG  I   V   GT + ++ +
Sbjct: 8   LLTILAFVAVIGPLVFVHELGHYLVGRWCGVKAEAFSIGFGPEIAAWVDRRGTRWRLAAL 67

Query: 65  PLGGYVK---------MLDGRVDDVPAEQQAMAFDKQSLWKRSAIVSAGPIFNFLFAIFA 115
           PLGGYV+           D +  ++ A+ +A +F  + LW+R+AIV+AGP  NFLFAI  
Sbjct: 68  PLGGYVRFKGDMNAASQTDPKWLEMSAQDRAESFPAKPLWQRAAIVAAGPAINFLFAILI 127

Query: 116 Y-WLVFMIGVPAVKPVIGEVTPYSIAAQAGLEPGMEIKAVSG 156
                F+ G      V G V P S AA AG++PG  I +++G
Sbjct: 128 LAAFAFLHGESRTPAVAGMVQPGSAAAMAGIQPGDRIVSLNG 169