Pairwise Alignments

Query, 803 a.a., outer membrane protein assembly factor BamA from Vibrio cholerae E7946 ATCC 55056

Subject, 806 a.a., outer membrane protein assembly factor BamA from Rhodanobacter sp000427505 FW510-R12

 Score =  507 bits (1306), Expect = e-148
 Identities = 293/834 (35%), Positives = 454/834 (54%), Gaps = 61/834 (7%)

Query: 3   MKQILLATLLAT-SVSANGAEKFVVQDIQIDGLQRVALGAALLKMPVRVGDSVDSQDVAN 61
           MK+I    LLA+ S +A   + FVV DI+IDGL R++ G     +P+  GD + +     
Sbjct: 1   MKRIAALILLASLSANAFAFDPFVVSDIRIDGLSRISAGTVYNYLPINKGDQLTNDGAQR 60

Query: 62  IIKALYSSGNFEDVKVLRDGNTLMVQVKERPTIASVSFSGNKAIKEEQLKQNLEASSIRV 121
            I+ALY +  F DV+  R+G+ L+++V ERP+IA ++  GNK IK + LK+ L+   +  
Sbjct: 61  AIRALYRTKFFSDVEFEREGSILVIKVVERPSIAKLTLRGNKDIKTDDLKKGLKEIGLTE 120

Query: 122 GEALDRTTLSNIEKGLEDFYYSVGKYNATVKAVVTPLPRNRADLKFVFTEGVSAKIQQIN 181
           GE  DR  L N+++ L   YY+ GKYN +V   VT L RNR  ++    EG +AKI+++N
Sbjct: 121 GETFDRLALDNVQQELTRQYYNRGKYNVSVDPHVTRLDRNRVAVEIEIREGKAAKIKELN 180

Query: 182 FIGNQVFSDEELLSRFNLNVD--VAWWNFLADDKYKKQVLAGDIEALRTYYLDRGYLKFQ 239
            +GN  F+++++   F  +    ++W++   DD+Y ++ L+GD+E L++YY+DRGY  F 
Sbjct: 181 ILGNHAFTNKQIRKNFESDTTNWMSWYS--KDDQYSREKLSGDLEKLQSYYMDRGYADFG 238

Query: 240 VDSTQVAISPDKKGVYITLNLNEGEPYTVSKVQFRGELMGKEAEFTSLIPFEIGETYNGS 299
           VDSTQVAI+PDK+ +YI  ++ EGE Y V+ V+  G+L+  EA    L+  + GET+N +
Sbjct: 239 VDSTQVAIAPDKRAMYIDASIKEGEIYKVADVKLLGDLILPEATMRQLVFVKSGETFNRA 298

Query: 300 AVTRLEESVKKVLGESGYAYPQVRTIPEFDDEKQQVSLVVHVEAGKRVYVRDIRFVGNNS 359
           AV    +++K +L   GYAY +V  IP+ D EK+ V L ++VE G+RVYVR + F GN  
Sbjct: 299 AVEASTKAIKAILANIGYAYAKVTPIPKLDKEKRTVDLTLYVEPGQRVYVRRVVFQGNTR 358

Query: 360 TRDEVLRREMRQMEGSWLNSKDIETGKTRLNRLGFFETVEVQTVRVPGSEDQVDLVYSVK 419
           T D+VLRREMRQ+EG+W N   ++  K RL RLG+F+ V++    VPG++D+VD+   V+
Sbjct: 359 TEDDVLRREMRQLEGTWYNQAAVDRSKVRLQRLGYFKKVDIDQKMVPGTQDKVDVTVKVE 418

Query: 420 EANSGNVNFGVGYGTESGVSFQVGLQQDNFLGSGNRVGVNAMINDYQKNLTLEYRDPYWN 479
           E ++G++ FG+GY   SG+     + Q+N  G+G+   ++   + Y   L L Y +PY  
Sbjct: 419 EQSAGSMQFGIGYSQYSGIILNASVSQNNLFGTGDSFSISGERSTYYTRLGLNYYNPYLT 478

Query: 480 LDGVSLGGKVFYNQFEASEAGIVDYTNESYGTSLTWGFPFDELNRFEFGIGYTHNKIGNL 539
             G+ +G    Y++ +       +Y   +   S   G P  E +    G+G + N + NL
Sbjct: 479 DSGIGIGYSASYSKTDYGNTDFANYATSAKSFSTYLGIPISETDGLRVGLGVSSNNV-NL 537

Query: 540 TPYLQVENFLAAQASNIDSGGNLLTDDFDINLSWTRNNLNNSYFPTAGNHQRAFYKMTVP 599
                 E  L  Q    +  GN     +   L W  +  N+ + PT G    A   + +P
Sbjct: 538 FQGYSPEVLLDYQ----NEIGNKTIHTWTGTLGWNHDTRNSYWAPTRGGLISASTDVALP 593

Query: 600 GSDAQYFKLQYDVRQYFPLTKKHEFTLLLRGRLGYGNGYGQTDGKDNLF----------- 648
           GS  QY+KL  ++  Y+P+ K   F L L G++GYG  YG     D+ F           
Sbjct: 594 GSTVQYWKLNTEINHYWPIGK--GFVLYLDGQVGYGKTYGGNGISDDAFAALKSASLAQN 651

Query: 649 ------------PFYENFYAGGFTSLRGFGSNSAGPKAVY----RDYSGS-NNGSDTATD 691
                       PF++NFYAGG   +RG+  N+ GP+        D  G+ NNG+     
Sbjct: 652 PNHVLTDMRQDLPFWQNFYAGGVRDVRGYQDNTLGPRVCIDGSAPDAKGTCNNGA--YYS 709

Query: 692 DSVGGNAIALASVELIVPTPFASEEARNQIRTSIFYDMASVWDTEFDYRGKADYGNQYYY 751
             +GG    L + ++ +P PF  +   N  R S F D+ +V+    DY+           
Sbjct: 710 QPIGGAFKVLGTAQVFLPLPFLKDV--NTARVSWFMDVGNVYK---DYKS---------- 754

Query: 752 DYSDPTNYRSSYGVALQWVSPMGPLVFSLAKPIKKYEGDD--EEFFTFTIGRTF 803
              D +  R+S G++LQW +P+GPL+ S A P++    D   EE   FT G  F
Sbjct: 755 --FDASELRASTGLSLQWQAPIGPLIISFAMPLRSKAADRNYEERIQFTFGSQF 806