Pairwise Alignments

Query, 803 a.a., outer membrane protein assembly factor BamA from Vibrio cholerae E7946 ATCC 55056

Subject, 832 a.a., Outer membrane protein assembly factor BamA from Xanthobacter sp. DMC5

 Score =  266 bits (681), Expect = 3e-75
 Identities = 215/780 (27%), Positives = 350/780 (44%), Gaps = 62/780 (7%)

Query: 64  KALYSSGNFEDVKVLRDGNTLMVQVKERPTIASVSFSGNKAIKEEQLKQNLEASSIRVGE 123
           KALY++G F DV++ + G  ++V+V E   I  V F GNK IK+E L+  +++   +   
Sbjct: 75  KALYATGLFSDVQINQSGGRIVVRVAENEVINRVVFEGNKKIKDEVLEGEVQS---KPRG 131

Query: 124 ALDRTTLSNIEKGLEDFYYSVGKYNATVKAVVTPLPRNRADLKFVFTEGVSAKIQQINFI 183
             +++ +    + + + Y   G+ +  V  V       R DL F   EG    I+ I F+
Sbjct: 132 PFNKSVVQADTQRIIEVYRRSGRSDVRVNPVTIDRGNGRVDLVFEIREGDKTGIKDIKFV 191

Query: 184 GNQVFSDEELLSRFNLNVDVAWWNFL-ADDKYKKQVLAGDIEALRTYYLDRGYLKFQVDS 242
           GN+ FSD +L    +      W +FL + D Y    +  D E LR +YL  GY  F++  
Sbjct: 192 GNKAFSDWKLKDVIS-TTQTNWLSFLKSTDAYDPDRVNSDQELLRRFYLKNGYADFRIIG 250

Query: 243 TQVAISPDKKGVYITLNLNEGEPYTVSKVQFRGELMGKEAE-FTSLIPFEIGETYNGSAV 301
               + P   G  +T  L EG+ Y   KV     +    A+    ++  + G+ YN   V
Sbjct: 251 ATAELDPAGGGYILTFTLEEGDQYRFGKVDVISNIRDLAADSLKRVVRAQDGQIYNAELV 310

Query: 302 TRLEESVKKVLGESGYAYPQVRTIPEFDDEKQQVSLVVHVEAGKRVYVRDIRFVGNNSTR 361
            +  E++     +SGYA+ QVR   + D + + +++   +E G RVY+  I   GN  TR
Sbjct: 311 EKSVENLTIEASKSGYAFAQVRPRGDRDFQSKLINVSFVIEEGPRVYIERIEIRGNTRTR 370

Query: 362 DEVLRREMRQMEGSWLNSKDIETGKTRLNRLGFFETVEVQTVRVPGS-EDQVDLVYSVKE 420
           D V+RRE    EG   N   ++  + RL  LG+F+ V++ T   PGS  D+V L   V++
Sbjct: 371 DYVIRREFDIGEGDAYNRVLVDRAERRLRNLGYFKNVKITT--EPGSAPDRVILAVDVED 428

Query: 421 ANSGNVNFGVGYGTESGVSFQVGLQQDNFLGSGNRVGVNAMINDYQKNLTLEYRDPYWNL 480
             +G  +   GY T  G+  +V L + NFLG G  V V+  +  Y +     + +PY+  
Sbjct: 429 QPTGEFSISGGYSTADGIIGEVSLGEKNFLGRGQYVKVSGTLGQYSQGAEFSFTEPYFLG 488

Query: 481 DGVSLGGKVFYNQFEASEAGIVDYTNESYGTSLTWGFPF-DEL------NRFEFGIGYTH 533
             ++ G  +++   E +      Y     G  L +G P  DE+      N ++  I    
Sbjct: 489 YRLAAGFDLYWKNTETT--SYTPYGTNMVGGGLRFGLPITDEITLALRYNLYQRTINLCA 546

Query: 534 NKIGNLT-PYLQVENFLAAQASNIDSGGNLLTDDFDINLSWTRNNLNNSYFPTAGNHQRA 592
           N     T PY      ++    +  + G  +T      LS+  N+L+N+  PT G +   
Sbjct: 547 NYGEAYTVPYNYCATSISWAIRDAAAQGATITSALGYTLSF--NSLDNNQNPTQGIYAEL 604

Query: 593 FYKMTVPGSDAQYFKLQYDVRQYFPLTKKHEFTLLLRGRLGYGNGYGQTDGKDNLFPFYE 652
              +   G D  + +   D+R Y PL    +  L+LR + GY + +G  D         +
Sbjct: 605 KQDLAGVGGDVNFIRTTGDIRHYTPLPA--DSVLILRAQGGYVSSWGNQD-----LDVLD 657

Query: 653 NFYAGGFTSLRGFGSNSAGPKAVYRDYSGSNNGSDTATD------DSVGGNAIALASVEL 706
           NFY G    +RGF  +  GP+ +    + SN G+  A +      +++GG      S E+
Sbjct: 658 NFYMGP-NLVRGFAPSGIGPRDI-APCAASNKGTPLAYNCANDQLNALGGTTYWGVSAEI 715

Query: 707 IVPTPFASEEARNQIRTSIFYDMASV--WDTEFDYRGKADYGNQYYYD------------ 752
             P  F  ++    ++ +IF D  S+  +D    ++G  +Y    +Y             
Sbjct: 716 QFPFAFLPKDI--GMKGAIFADAGSLFNFDGPTTFKGVPNYNGSNFYGNPNLVTCPGNAA 773

Query: 753 ---------YSDPTNYRSSYGVALQWVSPMGPLVFSLAKPIKKYEGDDEEFFTFTIGRTF 803
                    Y D T  RSS GV+L W SP GPL F  A  + +   D  + F F+ G  F
Sbjct: 774 SAPKSNVCVYDDDT-VRSSVGVSLIWQSPFGPLRFDYAWVLSQATYDQTQAFRFSGGTRF 832