Pairwise Alignments

Query, 803 a.a., outer membrane protein assembly factor BamA from Vibrio cholerae E7946 ATCC 55056

Subject, 811 a.a., Outer membrane protein assembly factor YaeT from Variovorax sp. SCN45

 Score =  487 bits (1254), Expect = e-142
 Identities = 284/796 (35%), Positives = 439/796 (55%), Gaps = 46/796 (5%)

Query: 8   LATLLATSVSANGA---EKFVVQDIQIDGLQRVALGAALLKMPVRVGDSVDSQDVANIIK 64
           +  ++A++++A  A   E F V+DI+++GLQRV  G     +P+RVGD+   +  +  I+
Sbjct: 13  VVAVVASALAATAAWAVEPFTVRDIRVEGLQRVEAGTIFASLPLRVGDTYSDERGSAAIR 72

Query: 65  ALYSSGNFEDVKVLRDGNTLMVQVKERPTIASVSFSGNKAIKEEQLKQNLEASSIRVGEA 124
           AL+  G F+DV++  +GN L+V V+ERPTIA V F G K   +  L + L    +  G  
Sbjct: 73  ALFELGLFKDVRIDVNGNVLVVIVEERPTIADVDFVGTKEFDKAALTKALREVGLTDGRP 132

Query: 125 LDRTTLSNIEKGLEDFYYSVGKYNATVKAVVTPLPRNRADLKFVFTEGVSAKIQQINFIG 184
            D+      E+ L+  Y S   YNA V   VTP+ RNR +L F  TEG SA+I++++ +G
Sbjct: 133 YDKALTDRAEQELKRQYVSRSLYNAQVVTTVTPIERNRVNLTFTVTEGESARIREVHVVG 192

Query: 185 NQVFSDEELLSRFNLNVDVAWWNFLADDKYKKQVLAGDIEALRTYYLDRGYLKFQVDSTQ 244
           N+ FS+  LLS F+ +       +   ++Y +  L  D+E LR+YY+ RGYL+F++DSTQ
Sbjct: 193 NKAFSESTLLSLFDQDSGGFMSWYTKSNQYSRAKLNADLETLRSYYITRGYLEFRIDSTQ 252

Query: 245 VAISPDKKGVYITLNLNEGEPYTVSKVQFRGELMGKEAEFTSLIPFEIGETYNGSAVTRL 304
           VAISPD+K + +T+N++EGE + V+ V+  G  +G++ EF SLI  + GE YNG  VT  
Sbjct: 253 VAISPDRKDLTVTVNISEGEKFVVAGVKLDGNYLGRDDEFKSLITIKPGEPYNGEQVTET 312

Query: 305 EESVKKVLGESGYAYPQVRTIPEFDDEKQQVSLVVHVEAGKRVYVRDIRFVGNNSTRDEV 364
            ++     G  GYA+ +V+  P+ D    +V+L +  E  +RVYVR +   GNN TRDEV
Sbjct: 313 TKAFNDYFGTFGYAFARVQARPDIDRVNNRVTLTLQAEPSRRVYVRRVMVGGNNKTRDEV 372

Query: 365 LRREMRQMEGSWLNSKDIETGKTRLNRLGFFETVEVQTVRVPGSEDQVDLVYSVKEANSG 424
           +RRE RQ E SW +   I+  + R++RLGFF  V V+T  VPGS DQVDL  +V E  +G
Sbjct: 373 IRREFRQYEASWYDGDKIKLSRDRVDRLGFFTEVNVETQEVPGSPDQVDLTVNVAEKPTG 432

Query: 425 NVNFGVGYGTESGVSFQVGLQQDNFLGSGNRVGVNAMINDYQKNLTLEYRDPYWNLDGVS 484
           ++  G GY +   V+   G+ Q+N  GSGN +GV    + Y + L+L   DPY+  DG+S
Sbjct: 433 SLQLGAGYSSSDKVALTFGISQENVFGSGNFLGVQVNTSKYNRTLSLTTTDPYFTKDGIS 492

Query: 485 LGGKVFY---NQFEASEAGIVDYTNESYGTSLTWGFPFDELNRFEFGIG-----YTHNKI 536
               V++     +  SE G  DY   + G S+ +G PF E++   FGIG     +  N+ 
Sbjct: 493 RTISVYHTTTRPYSTSEDG--DYKLVNQGASIRFGVPFSEVDTVFFGIGLERYAFDPNRS 550

Query: 537 GNLTPYLQVENFLAAQASNIDSGGNLLTD-------DFDINLSWTRNNLNNSYFPTAGNH 589
                     ++L+      DS G  +            +++ W R++ +++  PT G  
Sbjct: 551 SIFAGLYTPNSYLSYFKCQKDSTGFFVLGCDQKSVWGVPLSVGWGRDSRDSALTPTTGRL 610

Query: 590 QRAFYKMTVPGSDAQYFKLQYDVRQYFPLTKKHEFTLLLRGRLGYGNGYGQTDGKDNLFP 649
           QRA  ++ V G D +Y K  Y  +Q+F + K++ F+  + G +GY    G T      +P
Sbjct: 611 QRANLELGV-GGDMKYIKTNYQYQQFFAINKQYTFS--VNGEVGYAKALGST-----TYP 662

Query: 650 FYENFYAGGFTSLRGFGSNSAGPKAVYRDYSGSNNGSDTATDDSVGGNAIALASVELIVP 709
            ++NFYAGG  S+RGF  NS GP+ V     G  +G+      ++GG   A+ + EL  P
Sbjct: 663 IFKNFYAGGLGSIRGFEQNSLGPRDV--PLFGQTDGA------ALGGTKKAIFNAELSTP 714

Query: 710 TPFASEEARNQIRTSIFYDMASVWDTEFDYRGKADYGNQYYYDYSDPTNYRSSYGVALQW 769
            P A  +    +R   F+D+ +V+ +       A +  Q           R+S G+ + W
Sbjct: 715 FPGAGND--RTLRLYSFFDIGNVFGSRAPGLTDAQWSAQ--------KKLRASVGLGVSW 764

Query: 770 VSPMGPLVFSLAKPIK 785
           +SP+GPL  + A PIK
Sbjct: 765 ISPLGPLRLAYAFPIK 780