Pairwise Alignments

Query, 803 a.a., outer membrane protein assembly factor BamA from Vibrio cholerae E7946 ATCC 55056

Subject, 800 a.a., Outer membrane protein assembly factor YaeT from Variovorax sp. SCN45

 Score =  490 bits (1261), Expect = e-142
 Identities = 288/829 (34%), Positives = 439/829 (52%), Gaps = 61/829 (7%)

Query: 1   MAMKQILLATLLATSVSANGAEKFVVQDIQIDGLQRVALGAALLKMPVRVGDSVDSQDVA 60
           +A   +LLA+L A  + A   + F V+DI+++GLQRV  G     M +R GD+   +  A
Sbjct: 7   LAAAAVLLASLAA--LPAWATDPFTVKDIRLEGLQRVEPGTVFATMGLRTGDTYSDERGA 64

Query: 61  NIIKALYSSGNFEDVKVLRDGNTLMVQVKERPTIASVSFSGNKAIKEEQLKQNLEASSIR 120
           N I+ L+  G F+DV++  +GN L+V V+ERP +A V F G K   +  L++ L    + 
Sbjct: 65  NAIRELFKLGLFKDVRIDVNGNVLVVVVEERPAVADVDFVGAKEFDKAALQKALREIGLA 124

Query: 121 VGEALDRTTLSNIEKGLEDFYYSVGKYNATVKAVVTPLPRNRADLKFVFTEGVSAKIQQI 180
            G+A D+      E+ L+  Y S   YNA V   VTPL  NR +L F  TEG  A+I+++
Sbjct: 125 EGQAFDKALADRAEQELKRQYISRSLYNAQVITTVTPLENNRVNLTFTVTEGEPARIREV 184

Query: 181 NFIGNQVFSDEELLSRFNLNVD--VAWWNFLADDKYKKQVLAGDIEALRTYYLDRGYLKF 238
           + +GN+ FS+  LL  F+ +    +AW+     ++Y +   +GD+E LR++Y+ RGYL+F
Sbjct: 185 HVVGNKAFSESTLLDLFDQDTGGWLAWYT--KSNQYSRTKFSGDMETLRSFYITRGYLEF 242

Query: 239 QVDSTQVAISPDKKGVYITLNLNEGEPYTVSKVQFRGELMGKEAEFTSLIPFEIGETYNG 298
           ++DSTQVAISPD++ + +T+N+ EGE + V+ V+  G+ MG++ EF +L+    G+ YNG
Sbjct: 243 RIDSTQVAISPDRQTIVLTINITEGEKFAVAGVKLAGDYMGRDDEFKTLVTIRPGQPYNG 302

Query: 299 SAVTRLEESVKKVLGESGYAYPQVRTIPEFDDEKQQVSLVVHVEAGKRVYVRDIRFVGNN 358
            AV    ++     G  GYA+ +V   PE D    +V+LV+  EA +R YVR I   GN 
Sbjct: 303 EAVAATTKAFTDYFGTFGYAFARVTAEPEIDRANNRVTLVLKAEASRRAYVRRINIGGNA 362

Query: 359 STRDEVLRREMRQMEGSWLNSKDIETGKTRLNRLGFFETVEVQTVRVPGSEDQVDLVYSV 418
            TRDEV+RRE RQ EG+W +   I+  + R++RLGFF  V V T+ VPGS DQVDL  +V
Sbjct: 363 KTRDEVIRREFRQYEGAWYDGNKIKASRDRIDRLGFFTDVSVDTIDVPGSPDQVDLAVNV 422

Query: 419 KEANSGNVNFGVGYGTESGVSFQVGLQQDNFLGSGNRVGVNAMINDYQKNLTLEYRDPYW 478
            E  +G++  G GY +   VS   G+ Q+N  GSGN +G+N   + Y + ++L   DPY+
Sbjct: 423 TEKPTGSLQLGAGYSSTDKVSLSFGITQENVFGSGNYLGLNVNTSSYNRTISLTATDPYF 482

Query: 479 NLDGVSLGGKVFYNQFEASEAGIVDYTNESYGTSLTWGFPFDELNRFEFGIGYTH----- 533
             DG+S    VF+           +Y   S G S+ +GFP  E +    GIG        
Sbjct: 483 TKDGISRTLNVFHTTTRPYYEADGNYKLASDGGSVRFGFPVGEQDTVFLGIGVERYSFTP 542

Query: 534 -----------NKIGNLTPYLQVENFLAAQASNIDSGGNLLTDDFDINLSWTRNNLNNSY 582
                      + +   TP   ++ F     +   +            L W+R++ +++ 
Sbjct: 543 GTNGTYALVDGSYVYTATPQAYLDYFKCTGTAPSVTCAKSSVVGIPATLGWSRDDRDSAL 602

Query: 583 FPTAGNHQRAFYKMTVPGSDAQYFKLQYDVRQYFPLTKKHEFTLLLRGRLGYGNGYGQTD 642
            PT G  Q A  ++ V GS+ +Y K  Y  +QYFPL+K  ++TL + G+LGY    G   
Sbjct: 603 VPTRGKLQSANLEVGV-GSELRYLKTNYQYQQYFPLSK--QYTLAINGQLGYARALG--- 656

Query: 643 GKDNLFPFYENFYAGGFTSLRGFGSNSAGPKAVYRDYSGSNNGSDTATDDSVGGNAIALA 702
             D+ +P ++NFYAGG  S+RGF  NS GPK             D+ TD ++GG   A+ 
Sbjct: 657 --DSTYPIFKNFYAGGLGSIRGFEQNSLGPK-------------DSVTDGALGGTRKAIF 701

Query: 703 SVELIVPTPFASEEARNQIRTSIFYDMASVWDTEFDYRGKADYGNQYYYDYSDPTNYRSS 762
           ++E   P P A  +    +R   F D  +V+         A +  Q           R+S
Sbjct: 702 NMEFSTPFPGAGND--RTLRLYTFLDAGNVFADRTASMTDAQWKAQ--------NRLRAS 751

Query: 763 YGVALQWVSPMGPLVFSLAKPI--------KKYEGDDEEFFTFTIGRTF 803
            G+ + W+SP+GPL  + A P+             D  + F F IG +F
Sbjct: 752 AGIGISWISPLGPLRLAYAVPLLYQKEDTANNIAADRTQRFQFQIGTSF 800