Pairwise Alignments

Query, 803 a.a., outer membrane protein assembly factor BamA from Vibrio cholerae E7946 ATCC 55056

Subject, 767 a.a., outer membrane protein assembly factor BamA from Paraburkholderia sabiae LMG 24235

 Score =  479 bits (1234), Expect = e-139
 Identities = 277/808 (34%), Positives = 424/808 (52%), Gaps = 52/808 (6%)

Query: 1   MAMKQILLATLLATSVSANGAEKFVVQDIQIDGLQRVALGAALLKMPVRVGDSVDSQDVA 60
           +  K +L A + A    A     FVV+DI+I+GL+RV  G     +P+R GD+   +  +
Sbjct: 7   LVFKIVLAAAVAAHGPVAYATAPFVVRDIRIEGLRRVEPGTVFSYLPIRQGDTFTDEKAS 66

Query: 61  NIIKALYSSGNFEDVKVLRDGNTLMVQVKERPTIASVSFSGNKAIKEEQLKQNLEASSIR 120
             I+ALY++G F DVK+  +G+ ++VQV ERP I ++ FSG    +++ L + L A  + 
Sbjct: 67  GAIRALYATGFFNDVKIATEGDVVIVQVLERPAIGAIEFSGLHEFEKDNLIKALRAVGLS 126

Query: 121 VGEALDRTTLSNIEKGLEDFYYSVGKYNATVKAVVTPLPRNRADLKFVFTEGVSAKIQQI 180
            G   DR  +   E+ L+  Y + G Y A V   VTP+ RNR  + F   EG +AKI+QI
Sbjct: 127 QGRYFDRALVGKAEQQLKHQYLTRGFYAAEVTTTVTPIDRNRVAVLFAVIEGPNAKIRQI 186

Query: 181 NFIGNQVFSDEELLSRFNLNVDVAWWNFLADDKYKKQVLAGDIEALRTYYLDRGYLKFQV 240
           NFIGNQ  S   L     L+    +  +  +D Y K+ L GD+E +R+YYL+RGYL+F +
Sbjct: 187 NFIGNQAVSTGTLRDEMQLSTPNWFSWYTKNDLYSKEKLTGDLENVRSYYLNRGYLEFSI 246

Query: 241 DSTQVAISPDKKGVYITLNLNEGEPYTVSKVQFRGELMGKEAEFTSLIPFEIGETYNGSA 300
           +STQV+I+PDK+ +Y+T+ L+EGEPYT+  ++  G+++ +EAE   L+  + GE ++   
Sbjct: 247 ESTQVSITPDKRDMYLTVKLHEGEPYTIRSIRLAGDVLEREAELNKLVGIKPGERFSAEK 306

Query: 301 VTRLEESVKKVLGESGYAYPQVRTIPEFDDEKQQVSLVVHVEAGKRVYVRDIRFVGNNST 360
           +     ++   LGE GYA+  V   P+ D ++ +V L + V  G+RVYVR I   GN  T
Sbjct: 307 LQATTRAIVDRLGEYGYAFATVNAQPQIDPQRHEVDLTLQVSPGRRVYVRRINVGGNTRT 366

Query: 361 RDEVLRREMRQMEGSWLNSKDIETGKTRLNRLGFFETVEVQTVRVPGSEDQVDLVYSVKE 420
           RDEV+RREMRQ E +W +S  +   K R+NRLG+F  V+V T  V G+ DQVD+   V E
Sbjct: 367 RDEVVRREMRQFESAWFDSNRLALSKDRINRLGYFTDVDVTTAPVEGTPDQVDVDVKVAE 426

Query: 421 ANSGNVNFGVGYGTESGVSFQVGLQQDNFLGSGNRVGVNAMINDYQKNLTLEYRDPYWNL 480
             +G +  G G+ +   V    G+ QDN  GSG  + VN       + LT+   DPY+ +
Sbjct: 427 KPTGAITLGAGFSSTDKVVLSAGVSQDNVFGSGTSLSVNVNTAKTYRTLTVTQVDPYFTV 486

Query: 481 DGVSLGGKVFYNQFE-ASEAGIVDYTNESYGTSLTWGFPFDELNRFEFGIGYTHN--KIG 537
           DG+     V+Y  ++    A    +     G  L +G PF E++   FG+G+  N   + 
Sbjct: 487 DGIKRITDVYYRTYQPLISASDSTFRIVKLGGDLKFGIPFSEVDTVYFGLGFEQNTLDVN 546

Query: 538 NLTP--YLQVENFLAAQASNIDSGGNLLTDDFDINLSWTRNNLNNSYFPTAGNHQRAFYK 595
           + TP  YL         ++N+            + + W+R++ +++  P  G   +A  +
Sbjct: 547 SRTPQSYLDYVKSFGRVSNNV-----------PVTVGWSRDSRDSALVPGRGYLAQANAE 595

Query: 596 MTVPGSDAQYFKLQYDVRQYFPLTKKHEFTLLLRGRLGYGNGYGQTDGKDNLFPFYENFY 655
              P +  QY+K     + Y+   +     L L+G   YG G G   GK   FP ++N++
Sbjct: 596 YGTPIAGTQYYKADLQAQYYYSFARGFVLGLNLQG--SYGGGLG---GKP--FPIFKNYF 648

Query: 656 AGGFTSLRGFGSNSAGPKAVYRDYSGSNNGSDTATDDSVGGNAIALASVELIVPTPFASE 715
           AGG  S+RG+   S GP+             D  + D +GG+ + + +VEL  P P    
Sbjct: 649 AGGIGSVRGYEPGSLGPR-------------DAKSGDPIGGSKLVVGNVELSFPLPGTGY 695

Query: 716 EARNQIRTSIFYDMASVWDTEFDYRGKADYGNQYYYDYSDPTNYRSSYGVALQWVSPMGP 775
           +    +R   F D  +VW TE         GN            R  YG+ L W+SP+GP
Sbjct: 696 D--RTLRVFTFLDAGNVWGTE---------GNSI-----GANGLRYGYGLGLAWISPIGP 739

Query: 776 LVFSLAKPIKKYEGDDEEFFTFTIGRTF 803
           L  SL  P+ K+ GD  + F F IG  F
Sbjct: 740 LKLSLGFPLVKHAGDRYQKFQFQIGTAF 767