Pairwise Alignments

Query, 803 a.a., outer membrane protein assembly factor BamA from Vibrio cholerae E7946 ATCC 55056

Subject, 832 a.a., outer membrane protein assembly factor BamA from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  145 bits (366), Expect = 9e-39
 Identities = 196/868 (22%), Positives = 343/868 (39%), Gaps = 123/868 (14%)

Query: 2   AMKQILLATLLATSVSANGAEKFVVQDIQIDGLQRVALGAALLKMPVRVGD--SVDSQDV 59
           A  Q+L     ++ +      ++ + DI + G + +   A      ++ GD  +V  +D+
Sbjct: 17  ASSQVLDNPAQSSPIDYQQPRQYRIGDIAVSGYKFLDPIALTSLTGLKEGDMITVPGEDI 76

Query: 60  ANIIKALYSSGNFEDVKVLR----DGNTLMVQVKERPTIASVSFSGNKAIKEEQLKQNLE 115
           +  I+ L+  G   DV V      D   L   + ERP +++  FSG    + E L++ + 
Sbjct: 77  SRAIQNLWDQGILGDVDVSARTEGDVIYLTFNLTERPRLSNFRFSGINKSQSETLREKVP 136

Query: 116 ASSIRVGEALDRTTLSNIEKGLEDFYYSVGKYNATVKAVVTP---LPRNRADLKFVFTEG 172
              ++ G  +    L++    + ++Y      NA V     P   LP N   L     +G
Sbjct: 137 ---LQKGRIVTDAVLNSTRNAVREYYIDKSFLNAKVNITQRPDSVLP-NSVVLNIHVDKG 192

Query: 173 VSAKIQQINFIGNQVFSDEELLSRFNLNVDVAWWNFLADDKYKKQVLAGDIEALRTYYLD 232
              K+  I  +GN+ FSD++L  +     +  ++   +  K+ +     D E+L  +Y  
Sbjct: 193 DKVKVGDIEIVGNEAFSDKKLERQLKNTKEKRFYKIFSSSKFNRTKFEEDKESLLAFYNS 252

Query: 233 RGYLKFQVDSTQV-AISPDKKGVYITLNLNEGEPYTVSKVQFRGELMGKEAEFTSLIPFE 291
           +GY    + S  V  IS D+ GV IT++  EG+ Y    + + G  +  +A    ++  E
Sbjct: 253 QGYRDATIVSDSVYRISDDRLGVQITVD--EGQRYYYRNITWTGNYLYDDAYLARVLGIE 310

Query: 292 IGETYNGSAVTR------LEESVKKVLGESGYAYPQVRTIPEFDDEKQQVSLVVHVEAGK 345
            G+ Y+   + +          V  +    GY +  +  + E   E   + L + V  G 
Sbjct: 311 KGDVYDQQELEKRLTYNPAGVDVSALYQNDGYLFSSIDPV-EVRVEGDSIDLEMRVTEGP 369

Query: 346 RVYVRDIRFVGNNSTRDEVLRREMRQMEGSWLNSKDIETGKTRLNRLGFF--ETVEVQTV 403
           +  +  I   GN+ T D V+ RE+R + G   +  D+   +  L  LG+F  ET+ +  +
Sbjct: 370 QATIDKIIITGNDKTSDHVILREIRTLPGQKYSRDDLIRTRNELAALGYFDPETIGLNPI 429

Query: 404 RVPGSEDQVDLVYSVKEANSGNVNFGVGYGTESGVSFQVGLQQDNF-------------- 449
             P +E  VD+ YSV E  +  ++   G+G   G    VGL  +NF              
Sbjct: 430 PNP-AEGTVDIAYSVVERPNDQISLSGGWGGPIGAVGTVGLTLNNFSTRKMLDLSEWRPI 488

Query: 450 -LGSGNRVGVNAMIN-DYQKNLTLEYRDPYW-----NLDGVSL------GGKVFYNQFEA 496
             G G R+ +N   N  Y ++ +L + +P+      N   VSL          +YN  + 
Sbjct: 489 PTGDGQRLSLNIQANGKYYQSYSLSFTEPWLGGRKPNSLTVSLYRTIYRNASSYYNTADN 548

Query: 497 SEAGIVDYTN--ESYGTSLTWGFPFDELNRFEFGIGYTHNKIGNLTPYLQVENFLAAQAS 554
           +    +D      S G  L W   +  +N       YT      L  Y    NF    ++
Sbjct: 549 NIKSRLDVLGGAVSLGRRLNWPDNYFYMNHSLSYSRYT------LDDYPLAANFTDGTSN 602

Query: 555 NIDSGGNLLTDDFDINLSWTRNNLNNSYFPTAGNHQRAFYKMTVPGS------DAQYFKL 608
           +I     +            R++++N  FP  G+       +T P S      D  Y  +
Sbjct: 603 SISIVNTI-----------GRSSVDNPTFPRRGSSFTLSLNLTPPYSLFSDRDDDDYEFI 651

Query: 609 QYDVRQYFPLTKKHEFTLLLRGRLGYGN----GYGQTDGKDNLFPFYENFYAGGFTSLRG 664
           +++   +        + + + G L +      G+  T G   + PF E F  GG  +  G
Sbjct: 652 EFNKWMF-----DASYFINVAGNLVFNTRAHFGFLGTYGSGEVGPF-ERFKVGG--AGLG 703

Query: 665 FGSNSAGPKAV----YRDYS--GSNNGSDTATDDSVGGNAIALASVELIVPTPFASEEAR 718
            G+   G + +    Y D S   +NN ++  +   +  N     + +LI P P A+    
Sbjct: 704 GGNVFVGTEYIGLRGYEDESVVNTNNDNELLSSGGIAYNKFVFEARQLISPNPAAT---- 759

Query: 719 NQIRTSIFYDMASVWDTEFDYRGKADYGNQY--YYDYSDPTNYRSSYGVALQWVSPMGPL 776
                   Y +A V           + GN +  Y +Y+    YRS    A  ++S  G L
Sbjct: 760 -------IYGLAFV-----------EAGNNFGSYKNYNPFKLYRSVGVGARIFMSAFGLL 801

Query: 777 VFSLAKPIKKYEG---DDEEFFTFTIGR 801
            F  A  +    G   D    F F IG+
Sbjct: 802 GFDYAWRLDTLPGQMDDKRGMFHFIIGQ 829