Pairwise Alignments

Query, 803 a.a., outer membrane protein assembly factor BamA from Vibrio cholerae E7946 ATCC 55056

Subject, 755 a.a., outer membrane protein assembly factor BamA from Magnetospirillum magneticum AMB-1

 Score =  294 bits (753), Expect = 1e-83
 Identities = 226/804 (28%), Positives = 368/804 (45%), Gaps = 64/804 (7%)

Query: 7   LLATLLATSVSANGAEKFVVQDIQIDGLQRVALGAALLKMPVRVGDSVDSQDVANIIKAL 66
           +L  +L   + A+  E   ++ I I G QR+ +      M V  GD  D+  V   +KAL
Sbjct: 9   VLLGILVGVMPASAQEGGRIRSISILGTQRIEVETVKSYMTVAEGDLYDTDRVNRSLKAL 68

Query: 67  YSSGNFEDVKVLRDGNTLMVQVKERPTIASVSFSGNKAIKEEQLKQNLEASSIRVGEALD 126
           +++G F+DV + R+G+ L+V+V E P I  +++ GN  IKEEQL   ++   +R      
Sbjct: 69  FNTGLFQDVAIRREGDQLLVRVVENPIINRIAYEGNNRIKEEQLNTEVQ---LRPRTVYT 125

Query: 127 RTTLSNIEKGLEDFYYSVGKYNATVKAVVTPLPRNRADLKFVFTEGVSAKIQQINFIGNQ 186
           R+ +    K + + Y   G++ ATV+  +  L +NR DL +  +EG    +++I F+GN+
Sbjct: 126 RSKVQADVKRILELYRRSGRFAATVEPKIIQLEQNRVDLVYEISEGQPTYVRRIAFVGNK 185

Query: 187 VFSDEELLSRFNLNVDVAWWNFLA-DDKYKKQVLAGDIEALRTYYLDRGYLKFQVDSTQV 245
            + D++ L       +  W+ FL  DD Y    +  D E LR YYL +G+  F+V S   
Sbjct: 186 RY-DQDKLREVLQTKEERWYRFLTTDDTYDPDRVTYDRELLRRYYLKQGFADFRVSSAIA 244

Query: 246 AISPDKKGVYITLNLNEGEPYTVSKVQFRGELMG-KEAEFTSLIPFEIGETYNGSAVTRL 304
            ++P ++G +IT  ++EGE Y         EL   K  +   L+  E G  YN   V  +
Sbjct: 245 ELTPSREGFFITYTIDEGERYKFGSSVINAELRDLKPEDLQPLLISETGGWYNADQVEDI 304

Query: 305 EESVKKVLGESGYAYPQVRTIPEFDDEKQQVSLVVHVEAGKRVYVRDIRFVGNNSTRDEV 364
            + +   +G  GYA+  V+   + + E   + +   ++ G RV+V  I   GN  T D+V
Sbjct: 305 VQRLTDAVGTKGYAFVDVKPQVQRNRETHTIDITYEIKEGPRVFVERIDISGNVRTLDQV 364

Query: 365 LRREMRQMEGSWLNSKDIETGKTRLNRLGFFETVEVQTVRVPGSEDQVDLVYSVKEANSG 424
           +RRE R +EG   NS  +   + RL  L FFE  EV  +    + D+  +   V+E ++G
Sbjct: 365 IRREFRLVEGDAFNSAKLRRSRQRLKDLNFFEKAEVTNIPSDTAPDRTIIKVDVQEKSTG 424

Query: 425 NVNFGVGYGTESGVSFQVGLQQDNFLGSGNRVGVNAMINDYQKNLTLEYRDPYWNLDGVS 484
            + FGVG+ + +G   +  L++ N LG G  + + A +   + +L L + +PY+    V+
Sbjct: 425 ELMFGVGWASSAGPIIEASLRERNLLGRGQDLRLGAGLGTKRSSLDLSFTEPYFMDREVA 484

Query: 485 LGGKVFYNQFEASEAGIVDYTNESYGTSLTWGFPFDELNRFEFGIGYTHNK-----IGNL 539
            G   F    +  +     Y   S G  L  G+   E  R +  + YT  +     I + 
Sbjct: 485 AGFDAFVIDRKLQKES--SYDASSIGGDLRAGYRLSESLRQD--VIYTLKQDTVKGISST 540

Query: 540 TPYLQVENFLAAQASNIDSGGNLLTDDFDINLSWTRNNLNNSYFPTAGNHQRAFYKMTVP 599
           +PY+  +  + ++ S++  G +L+ D  D  L  T       YF   G            
Sbjct: 541 SPYVLEQ--IGSKVSSV-IGQSLMYDRRDSRLDPT-----EGYFIKLGTDGAGL------ 586

Query: 600 GSDAQYFKLQYDVRQYFPLTKKHEFTLLLRGRLGYGNGYGQTDGKDNLFPFYENFYAGGF 659
           G D +Y +      QYF LT K          LG  +  G   G D      + F+ GG 
Sbjct: 587 GGDIRYLRGTLTGGQYFTLTDK--------VILGVSSSVGYIYGLDQRVRITDRFFVGG- 637

Query: 660 TSLRGFGSNSAGPKAVYRDYSGSNNGSDTATDDSVGGNAIALASVELIVPTPFASEEARN 719
            +LRGF +    P+             D  T D++GG   A+ S ++  P     E    
Sbjct: 638 DNLRGFANGGVSPR-------------DKNTGDALGGIWQAVGSAQVKFPLGLPEEFG-- 682

Query: 720 QIRTSIFYDMASVWDTEFDYRGKADYGNQYYYDYSDPTNYRSSYGVALQWVSPMGPLVFS 779
            +    F D+ +V +T+      AD            ++ R S GV + W SPMGP+   
Sbjct: 683 -VSGQAFTDIGAVGETD-----TADTA-----AVQQSSSVRVSPGVGISWKSPMGPVSVD 731

Query: 780 LAKPIKKYEGDDEEFFTFTIGRTF 803
           L  P+ K + D +EFF F  G  F
Sbjct: 732 LGYPLVKEKFDKKEFFRFNFGTKF 755