Pairwise Alignments

Query, 803 a.a., outer membrane protein assembly factor BamA from Vibrio cholerae E7946 ATCC 55056

Subject, 810 a.a., hypothetical protein (NCBI) from Escherichia coli BW25113

 Score =  946 bits (2445), Expect = 0.0
 Identities = 463/822 (56%), Positives = 606/822 (73%), Gaps = 31/822 (3%)

Query: 1   MAMKQILLATLLATSVSANGAEKFVVQDIQIDGLQRVALGAALLKMPVRVGDSVDSQDVA 60
           MAMK++L+A+LL +S +  GAE FVV+DI  +GLQRVA+GAALL MPVR GD+V+ +D++
Sbjct: 1   MAMKKLLIASLLFSSATVYGAEGFVVKDIHFEGLQRVAVGAALLSMPVRTGDTVNDEDIS 60

Query: 61  NIIKALYSSGNFEDVKVLRDGNTLMVQVKERPTIASVSFSGNKAIKEEQLKQNLEASSIR 120
           N I+AL+++GNFEDV+VLRDG+TL+VQVKERPTIAS++FSGNK++K++ LKQNLEAS +R
Sbjct: 61  NTIRALFATGNFEDVRVLRDGDTLLVQVKERPTIASITFSGNKSVKDDMLKQNLEASGVR 120

Query: 121 VGEALDRTTLSNIEKGLEDFYYSVGKYNATVKAVVTPLPRNRADLKFVFTEGVSAKIQQI 180
           VGE+LDRTT+++IEKGLEDFYYSVGKY+A+VKAVVTPLPRNR DLK VF EGVSA+IQQI
Sbjct: 121 VGESLDRTTIADIEKGLEDFYYSVGKYSASVKAVVTPLPRNRVDLKLVFQEGVSAEIQQI 180

Query: 181 NFIGNQVFSDEELLSRFNLNVDVAWWNFLADDKYKKQVLAGDIEALRTYYLDRGYLKFQV 240
           N +GN  F+ +EL+S F L  +V WWN + D KY+KQ LAGD+E LR+YYLDRGY +F +
Sbjct: 181 NIVGNHAFTTDELISHFQLRDEVPWWNVVGDRKYQKQKLAGDLETLRSYYLDRGYARFNI 240

Query: 241 DSTQVAISPDKKGVYITLNLNEGEPYTVSKVQFRGELMGKEAEFTSLIPFEIGETYNGSA 300
           DSTQV+++PDKKG+Y+T+N+ EG+ Y +S V+  G L G  AE   L   E GE YNG+ 
Sbjct: 241 DSTQVSLTPDKKGIYVTVNITEGDQYKLSGVEVSGNLAGHSAEIEQLTKIEPGELYNGTK 300

Query: 301 VTRLEESVKKVLGESGYAYPQVRTIPEFDDEKQQVSLVVHVEAGKRVYVRDIRFVGNNST 360
           VT++E+ +KK+LG  GYAYP+V+++PE +D  + V L V+V+AG R YVR IRF GN+++
Sbjct: 301 VTKMEDDIKKLLGRYGYAYPRVQSMPEINDADKTVKLRVNVDAGNRFYVRKIRFEGNDTS 360

Query: 361 RDEVLRREMRQMEGSWLNSKDIETGKTRLNRLGFFETVEVQTVRVPGSEDQVDLVYSVKE 420
           +D VLRREMRQMEG+WL S  ++ GK RLNRLGFFETV+  T RVPGS DQVD+VY VKE
Sbjct: 361 KDAVLRREMRQMEGAWLGSDLVDQGKERLNRLGFFETVDTDTQRVPGSPDQVDVVYKVKE 420

Query: 421 ANSGNVNFGVGYGTESGVSFQVGLQQDNFLGSGNRVGVNAMINDYQKNLTLEYRDPYWNL 480
            N+G+ NFG+GYGTESGVSFQ G+QQDN+LG+G  VG+N   NDYQ    L   +PY+ +
Sbjct: 421 RNTGSFNFGIGYGTESGVSFQAGVQQDNWLGTGYAVGINGTKNDYQTYAELSVTNPYFTV 480

Query: 481 DGVSLGGKVFYNQFEASEAGIVDYTNESYGTSLTWGFPFDELNRFEFGIGYTHNKIGNLT 540
           DGVSLGG++FYN F+A +A + DYTN+SYGT +T GFP +E N    G+GY HN + N+ 
Sbjct: 481 DGVSLGGRLFYNDFQADDADLSDYTNKSYGTDVTLGFPINEYNSLRAGLGYVHNSLSNMQ 540

Query: 541 PYLQVENFLAAQA---SNIDSGGNLLTDDFDINLSWTRNNLNNSYFPTAGNHQRAFYKMT 597
           P + +  +L +     S  D   +  TDDF  N  WT N L+  YFPT G+      K+T
Sbjct: 541 PQVAMWRYLYSMGEHPSTSDQDNSFKTDDFTFNYGWTYNKLDRGYFPTDGSRVNLTGKVT 600

Query: 598 VPGSDAQYFKLQYDVRQYFPLTKKHEFTLLLRGRLGYGNGYGQTDGKDNLFPFYENFYAG 657
           +PGSD +Y+K+  D   Y P+   H++ +L R R GYG+G G   GK+   PFYENFYAG
Sbjct: 601 IPGSDNEYYKVTLDTATYVPIDDDHKWVVLGRTRWGYGDGLG---GKE--MPFYENFYAG 655

Query: 658 GFTSLRGFGSNSAGPKAVYRDYSGSNNGSD--------------TATDDSVGGNAIALAS 703
           G +++RGF SN+ GPKAVY  +  SN   D                +DD+VGGNA+A+AS
Sbjct: 656 GSSTVRGFQSNTIGPKAVYFPHQASNYDPDYDYECATQDGAKDLCKSDDAVGGNAMAVAS 715

Query: 704 VELIVPTPFASEEARNQIRTSIFYDMASVWDTEFDYRGKADYGNQY--YYDYSDPTNYRS 761
           +E I PTPF S++  N +RTS F+DM +VWDT +D        +QY  Y DYSDP+N R 
Sbjct: 716 LEFITPTPFISDKYANSVRTSFFWDMGTVWDTNWD-------SSQYSGYPDYSDPSNIRM 768

Query: 762 SYGVALQWVSPMGPLVFSLAKPIKKYEGDDEEFFTFTIGRTF 803
           S G+ALQW+SP+GPLVFS A+P KKY+GD  E F F IG+T+
Sbjct: 769 SAGIALQWMSPLGPLVFSYAQPFKKYDGDKAEQFQFNIGKTW 810