Pairwise Alignments

Query, 803 a.a., outer membrane protein assembly factor BamA from Vibrio cholerae E7946 ATCC 55056

Subject, 805 a.a., outer membrane protein assembly factor BamA from Dickeya dianthicola ME23

 Score =  925 bits (2390), Expect = 0.0
 Identities = 460/814 (56%), Positives = 600/814 (73%), Gaps = 20/814 (2%)

Query: 1   MAMKQILLATLLATSVSANGAEKFVVQDIQIDGLQRVALGAALLKMPVRVGDSVDSQDVA 60
           MAMK++L+A+LL +S +  GA+ FVV+DI  +GLQRVA+GAALL MPVRVGD+V  +D+ 
Sbjct: 1   MAMKKLLIASLLFSSATVYGADGFVVKDIHFEGLQRVAVGAALLSMPVRVGDAVTDEDIG 60

Query: 61  NIIKALYSSGNFEDVKVLRDGNTLMVQVKERPTIASVSFSGNKAIKEEQLKQNLEASSIR 120
           NII+AL+++GNFEDV+VLRDG++L++QVKERPTIAS++FSGNKA+KEE LK+NLEAS +R
Sbjct: 61  NIIRALFATGNFEDVRVLRDGDSLLIQVKERPTIASLTFSGNKAVKEEMLKENLEASGVR 120

Query: 121 VGEALDRTTLSNIEKGLEDFYYSVGKYNATVKAVVTPLPRNRADLKFVFTEGVSAKIQQI 180
           VGEALDRTTLSNIEKGLEDFYYSVGKY+ATVKAVVTPLPRNR DLK VFTEGVSAKIQQI
Sbjct: 121 VGEALDRTTLSNIEKGLEDFYYSVGKYSATVKAVVTPLPRNRVDLKLVFTEGVSAKIQQI 180

Query: 181 NFIGNQVFSDEELLSRFNLNVDVAWWNFLADDKYKKQVLAGDIEALRTYYLDRGYLKFQV 240
           N +GN+ FS +EL+SRF L  +V WWN + D KY+KQ L+GD+E LR++YLDRGY +F +
Sbjct: 181 NIVGNKSFSSDELISRFQLRDEVPWWNVVGDRKYEKQKLSGDLETLRSFYLDRGYARFNI 240

Query: 241 DSTQVAISPDKKGVYITLNLNEGEPYTVSKVQFRGELMGKEAEFTSLIPFEIGETYNGSA 300
           DSTQV+++PDKKG+YIT+N+ EG  Y +S V  RG L+G   E   L   + GE YNG+ 
Sbjct: 241 DSTQVSLTPDKKGIYITINVTEGNQYKLSGVVVRGNLVGHATEIEDLTRVQPGELYNGTK 300

Query: 301 VTRLEESVKKVLGESGYAYPQVRTIPEFDDEKQQVSLVVHVEAGKRVYVRDIRFVGNNST 360
           VTR+EE +KK+LG  GYAYP+V T PE +D  + V L ++V+AG R  VR IRF GN+ +
Sbjct: 301 VTRMEEDIKKLLGRYGYAYPRVVTQPEINDTDKTVRLSINVDAGNRFTVRRIRFDGNDVS 360

Query: 361 RDEVLRREMRQMEGSWLNSKDIETGKTRLNRLGFFETVEVQTVRVPGSEDQVDLVYSVKE 420
           +D+VLRREMRQMEG WL +  ++ GK RLNRLG+FE+V+V+T RVPG+ DQVD+VY VKE
Sbjct: 361 KDDVLRREMRQMEGGWLGNDLVQQGKERLNRLGYFESVDVETQRVPGTPDQVDVVYKVKE 420

Query: 421 ANSGNVNFGVGYGTESGVSFQVGLQQDNFLGSGNRVGVNAMINDYQKNLTLEYRDPYWNL 480
            N+G++NFGVG+GTESG+SFQ G+QQDN+LG+GN VG++   NDYQ  + L   DPY+ +
Sbjct: 421 RNTGSLNFGVGFGTESGISFQAGVQQDNWLGTGNSVGISGTRNDYQTYVELSMTDPYFTV 480

Query: 481 DGVSLGGKVFYNQFEASEAGIVDYTNESYGTSLTWGFPFDELNRFEFGIGYTHNKIGNLT 540
           DGVSLGG++FYN F+A +A + DYTN+SYG   T GFP +E N    G+ Y HN + ++ 
Sbjct: 481 DGVSLGGRIFYNNFKALDADLSDYTNQSYGAGTTLGFPINENNSLRVGVDYVHNSLSDMK 540

Query: 541 PYLQVENFLAAQASNID----SGGNLLTDDFDINLSWTRNNLNNSYFPTAGNHQRAFYKM 596
           P + +  +L     + D    S  +   +DF +   WT NNL+  YFPTAGN      K+
Sbjct: 541 PQVAMWRYLNKAGVDPDPSTTSSVSFDANDFFLTSGWTYNNLDRGYFPTAGNRANLNSKV 600

Query: 597 TVPGSDAQYFKLQYDVRQYFPLTKKHEFTLLLRGRLGYGNGYGQTDGKDNLFPFYENFYA 656
           TVPGSD +Y+KL +D   YFPL++ H + L+ R + GY +G     GK+   PFY+NF+A
Sbjct: 601 TVPGSDNEYYKLTFDSASYFPLSENHNWVLMARTKAGYADG---LSGKE--VPFYDNFFA 655

Query: 657 GGFTSLRGFGSNSAGPKAVYRDYSGSNNGS-------DTATDDSVGGNAIALASVELIVP 709
           GG +S+RGF SN+ GPKA Y  Y+G +  S        T   D+VGGNA+A AS ELIVP
Sbjct: 656 GGSSSVRGFRSNTIGPKAAY--YTGCSTTSVSSCSIDPTKMRDAVGGNAMAAASAELIVP 713

Query: 710 TPFASEEARNQIRTSIFYDMASVWDTEFDYRGKADYGNQYYYDYSDPTNYRSSYGVALQW 769
           TPF S++  + +RTS F D  +VWDT ++   +         DYS P N R S G+A+QW
Sbjct: 714 TPFISDKYSSSVRTSFFVDAGTVWDTHWENTAQTLAAG--VPDYSTPGNIRMSSGLAVQW 771

Query: 770 VSPMGPLVFSLAKPIKKYEGDDEEFFTFTIGRTF 803
           +SP+GPLVFS A+P KKYEGD  E F F IG+T+
Sbjct: 772 MSPLGPLVFSYAQPFKKYEGDRSEQFQFNIGKTW 805