Pairwise Alignments

Query, 803 a.a., outer membrane protein assembly factor BamA from Vibrio cholerae E7946 ATCC 55056

Subject, 855 a.a., outer membrane protein assembly factor BamA from Acinetobacter baumannii LAC-4

 Score =  509 bits (1310), Expect = e-148
 Identities = 292/844 (34%), Positives = 459/844 (54%), Gaps = 63/844 (7%)

Query: 6   ILLATLLATSVSANGAEKFVVQDIQIDGLQRVALGAALLKMPVRVGDSVDSQDVANIIKA 65
           + L + +A    A  A+ FVV+DI+++GL R+        +P+  GD V+   +A  I+ 
Sbjct: 29  LALVSAMAAVQQAYAADDFVVRDIRVNGLVRLTPANVYTMLPINSGDRVNEPMIAEAIRT 88

Query: 66  LYSSGNFEDVKVLRDGNTLMVQVKERPTIASVSFSGNKAIKEEQLKQNLEASSIRVGEAL 125
           LY++G F+D+K  ++ +TL+  V ERP I+ + F GNK I +E L+Q L+   I  GE  
Sbjct: 89  LYATGLFDDIKASKENDTLVFNVIERPIISKLEFKGNKLIPKEALEQGLKKMGIAEGEVF 148

Query: 126 DRTTLSNIEKGLEDFYYSVGKYNATVKAVVTPLPRNRADLKFVFTEGVSAKIQQINFIGN 185
            ++ L  IE  LE  Y   G+Y+A V       P NR +LK  F EG  AK+  IN IGN
Sbjct: 149 KKSALQTIETELEQQYTQQGRYDADVAVDTVARPNNRVELKINFNEGTPAKVFDINVIGN 208

Query: 186 QVFSDEELLSRFNLNVDVAWWNFLA-DDKYKKQVLAGDIEALRTYYLDRGYLKFQVDSTQ 244
            VF D E+   F +  +  W + +  +D+Y ++ +A  +EALR  YL++GY+ F ++++Q
Sbjct: 209 TVFKDSEIKQAFAVK-ESGWASVVTRNDRYAREKMAASLEALRAMYLNKGYINFNINNSQ 267

Query: 245 VAISPDKKGVYITLNLNEGEPYTVSKVQFRGELMGKEAEFTSLIPFEIGETYNGSAVTRL 304
           + IS DKK ++I + ++EG  +   + +F G+ + K  E  +L  ++ G+TY+   V  +
Sbjct: 268 LNISEDKKHIFIEVAVDEGSQFKFGQTKFLGDALYKPEELQALKIYKDGDTYSQEKVNAV 327

Query: 305 EESVKKVLGESGYAYPQVRTIPEFDDEKQQVSLVVHVEAGKRVYVRDIRFVGNNSTRDEV 364
           ++ + +  G +GY +  V  +P+ ++E   V L  +V  G++V VR I F GN+ T DEV
Sbjct: 328 KQLLLRKYGNAGYYFADVNIVPQINNETGVVDLNYYVNPGQQVTVRRINFTGNSKTSDEV 387

Query: 365 LRREMRQMEGSWLNSKDIETGKTRLNRLGFFETVEVQTVRVPGSEDQVDLVYSVKEANSG 424
           LRREMRQMEG+  +++ I+  K RL R GFF+TV+++  R+P S DQVDL  +V+E +SG
Sbjct: 388 LRREMRQMEGALASNEKIDLSKVRLERTGFFKTVDIKPARIPNSPDQVDLNVNVEEQHSG 447

Query: 425 NVNFGVGYGTESGVSFQVGLQQDNFLGSGNRVGVNAMINDYQKNLTLEYRDPYWNLDGVS 484
                VGY    G++FQ GL Q NF+G+GNRV ++   ++ Q    L   DPY+ +DGVS
Sbjct: 448 TTTLAVGYSQSGGITFQAGLSQTNFMGTGNRVAIDLSRSETQDYYNLSVTDPYFTIDGVS 507

Query: 485 LGGKVFYNQFEAS-EAGIVDYTNESYGTSLTWGFPFDELNRFEFGIGYTHNKIGN---LT 540
            G  V+Y + + + +  + +Y  +S+G SL++G+P DE       +G  + K+     ++
Sbjct: 508 RGYNVYYRKTKLNDDYNVNNYVTDSFGGSLSFGYPIDENQSLSASVGVDNTKVTTGAFVS 567

Query: 541 PYLQVENFLAAQASNIDSG----------------------------GNLLTDDF---DI 569
            Y  V ++L A      S                             GN    +F   ++
Sbjct: 568 TY--VRDYLLANGGKTTSTNTYCLVDLVQDPQTGLYKCPEGQTSKPYGNAFEGEFFTYNL 625

Query: 570 NLSWTRNNLNNSYFPTAGNHQRAFYKMTVPGSDAQYFKLQYDVRQYFPLTKKHEFTLLLR 629
           NL W+ N LN   FPT+G   R   ++ +PGSD  Y K+ YD + +FP+     F L   
Sbjct: 626 NLGWSYNTLNRPIFPTSGMSHRVGLEIGLPGSDVDYQKVTYDTQAFFPIGST-GFVLRGY 684

Query: 630 GRLGYGNGYGQTDGKDNLFPFYENFYAGGFTSLRGFGSNSAGPKAVYRDYSGSNNGSDTA 689
           G+LGYGN            PFY+NFYAGG+ S+RG+ +++ GPK  Y   +      + +
Sbjct: 685 GKLGYGND----------LPFYKNFYAGGYGSVRGYDNSTLGPK--YASVNLQEEKKNDS 732

Query: 690 TDDSVGGNAIALASVELIVPTPFASEEARNQIRTSIFYDMASVWDTEFDYRGKADYGN-- 747
           + + VGGNA+     EL++P PF  +  R Q+R  +F +   V+DT+ D R  +   N  
Sbjct: 733 SPEEVGGNALLQFGTELVLPMPFKGDWTR-QVRPVLFAEGGQVFDTKCDVRSYSMIMNGQ 791

Query: 748 ------QYYYDY--SDPTNYRSSYGVALQWVSPMGPLVFSLAKPIKKYEGDDEEFFTFTI 799
                 +Y  D    D  N R S GV + W++ +GPL  S A P+    GD+ +   F I
Sbjct: 792 QISDAKKYCEDNYGFDLGNLRYSVGVGVTWITMIGPLSLSYAFPLNDKPGDETKEIQFEI 851

Query: 800 GRTF 803
           GRTF
Sbjct: 852 GRTF 855