Pairwise Alignments

Query, 379 a.a., lipid-A-disaccharide synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 379 a.a., lipid-A-disaccharide synthase from Pseudomonas simiae WCS417

 Score =  335 bits (858), Expect = 2e-96
 Identities = 182/373 (48%), Positives = 242/373 (64%), Gaps = 4/373 (1%)

Query: 5   LRIGIVVGELSGDTLGEGFIKAIRARYPDAEFVGIGGPKMNALGCQSLFDMEELAVMGLV 64
           L I +V GE SGD LG G ++A++A++P  EF+G+GGP M A G  S F ME L+VMGLV
Sbjct: 4   LCIALVAGEASGDILGAGLMRALKAQHPAVEFIGVGGPLMQAEGLTSYFPMERLSVMGLV 63

Query: 65  EVLGRLPRLLKVKAELVKYFTANPPDVFVGIDAPDFNLRLELSLKQAGIKTVHYVSPSVW 124
           EVLGRL  LL  +  L++      PDVF+GIDAPDF L +EL L+QAGIKTVHYVSPSVW
Sbjct: 64  EVLGRLRELLARRKLLIQTLIEEKPDVFIGIDAPDFTLNIELKLRQAGIKTVHYVSPSVW 123

Query: 125 AWRQNRIHGIAAATHLVLAFLPFEKAFYDKFNVPCEFIGHTLADSIPLASDKLAARQLLG 184
           AWRQ R+  I     L+L  LPFE  FY++  VP  F+GHTLAD+IPL +D+ AAR  LG
Sbjct: 124 AWRQKRVLKIREGCDLMLTLLPFEARFYEEKGVPVRFVGHTLADAIPLQADRAAARAELG 183

Query: 185 LDEQRRWLAVLPGSRGSEMKMLAEPFIATCQKLQARYPDLGFVVALVNAKRRAQFEQAWQ 244
           L +    +A++PGSRG E+  LA  F    ++L A  P + FV+   + +RRAQ E   +
Sbjct: 184 LPD-GPLVALMPGSRGGEVGRLASVFFDAAERLLALKPGVRFVLPCASPQRRAQIETLLE 242

Query: 245 QVAPELNFVLVDDTARNVITAADAVMLASGTVALECMLLKRPMVVGYRVNAFTAFLAKRL 304
                L   L+D  +   + A DAV++ASGT  LE +L KRPMVV YR+   T ++ KR+
Sbjct: 243 --GRNLPLTLLDGQSHLALAACDAVLIASGTATLEALLYKRPMVVAYRLAPLTFWILKRM 300

Query: 305 LKTPYVSLPNILAGEELVKELLQDHCTVDNLYHEVSRLLESDNQALMDKFTEMHQWIRKD 364
           +K+PY+SLPN+LA   LV ELLQD  T + L   +  L++   +     F ++H+ +R+D
Sbjct: 301 VKSPYISLPNLLAQRLLVPELLQDDATPEALAQTLLPLIDGGEEQTRG-FDDIHRILRRD 359

Query: 365 ADQQAAQAVLHLI 377
           A  QAA AVL LI
Sbjct: 360 ASNQAADAVLTLI 372