Pairwise Alignments

Query, 379 a.a., lipid-A-disaccharide synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 410 a.a., Lipid-A-disaccharide synthase from Azospirillum sp. SherDot2

 Score =  216 bits (549), Expect = 1e-60
 Identities = 142/384 (36%), Positives = 203/384 (52%), Gaps = 15/384 (3%)

Query: 5   LRIGIVVGELSGDTLGEGFIKAI-RARYPDAEFVGIGGPKMNALGCQSLFDMEELAVMGL 63
           L + ++ GE SGD LG   + A  R       FVGIGG +M A G  SLF M EL + G+
Sbjct: 11  LTLFLIAGEPSGDALGARLMAAAKRLTGGKVRFVGIGGERMTAEGLVSLFPMAELTLFGI 70

Query: 64  VEVLGRLPRLLKVKAELVKYFTANPPDVFVGIDAPDFNLRLELSLKQA--GIKTVHYVSP 121
            E+L  LP L++   + V       PD  VGID+P F +R+   L+ A   I  VHYV+P
Sbjct: 71  FELLPHLPNLIRRIDQTVAEILRMRPDAVVGIDSPGFTVRVAKKLRAADPAIPLVHYVAP 130

Query: 122 SVWAWRQNRIHGIAAATHLVLAFLPFEKAFYDKFNVPCEFIGHTLADSIPLASDKLAARQ 181
           +VWAW+  R    AA    +LA LPFE  +++K  + C F+GH++ +      D    RQ
Sbjct: 131 TVWAWKPKRAAKYAAIYDHLLAVLPFEPPYFEKEGLACTFVGHSVVEGRAGRGDGPGFRQ 190

Query: 182 LLGLDEQRRWLAVLPGSRGSEMKMLAEPFIATCQKLQARYPDLGFVVALVNA--KRRAQF 239
             G+    R +AVLPGSR  E+  L   F AT   L+  +PDL  VV  V     R A  
Sbjct: 191 RHGIAATDRVVAVLPGSRKGEVSRLLPDFRATLDLLRPSHPDLVAVVPTVATVHDRVAAA 250

Query: 240 EQAWQQVAPELNFVLVDDTAR-NVITAADAVMLASGTVALECMLLKRPMVVGYRVNAFTA 298
              W    P    ++  DT + +   AA+  + ASGTVALE  L + P V+ YR+N  T 
Sbjct: 251 IADW----PVRTLLVEGDTEKYDAFAAAEVALAASGTVALELALARLPTVIAYRLNPVTV 306

Query: 299 FLAKRLLKTPYVSLPNILAGEELVKELLQDHCTVDNLYHEVSRLLESD--NQALMDKFTE 356
            L +RL++  YV+L N++    LV ELLQ  C  D L  E+ RLL++    Q  +D   E
Sbjct: 307 ALYRRLIRVKYVNLVNLMLDRMLVPELLQQDCRPDRLAAELGRLLDNPEARQVQIDGVAE 366

Query: 357 MHQWIRK---DADQQAAQAVLHLI 377
           + +W+ +      ++AA+A+L ++
Sbjct: 367 VARWLGQGDIPPSERAARAILDVV 390