Pairwise Alignments

Query, 379 a.a., lipid-A-disaccharide synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 394 a.a., lipid A-disaccharide synthase from Agrobacterium fabrum C58

 Score =  166 bits (421), Expect = 8e-46
 Identities = 118/375 (31%), Positives = 190/375 (50%), Gaps = 15/375 (4%)

Query: 1   MNRPLRIGIVVGELSGDTLGEGFIKAIRARYPDA-EFVGIGGPKMNALGCQSLFDMEELA 59
           M   L++ ++ GE+SGD LG   I++++ RY  + E VG+GG  + A G  SLFD  EL+
Sbjct: 1   MTAALKVAVIAGEVSGDLLGADLIRSLKVRYAGSVELVGVGGEALEAQGLTSLFDYSELS 60

Query: 60  VMGLVEVLGRLPRLLKVKAELVKYFTANPPDVFVGIDAPDFNLRLELSLKQ--AGIKTVH 117
           +MG  +VL +LP+L+    +      A  PD+ + ID+PDF  R+   +++    +  V+
Sbjct: 61  IMGFTQVLKKLPKLIARINQTAAAIVAAKPDILLIIDSPDFTHRVAKKVRKQLPQLPVVN 120

Query: 118 YVSPSVWAWRQNRIHGIAAATHLVLAFLPFE-KAFYDKFNVPCEFIGHTLA-DSIPLASD 175
           YV PSVWAW++ R   + +    VLA LPFE +A       P  F+GH L+ D   LA+ 
Sbjct: 121 YVCPSVWAWKEYRATAMLSYVDHVLALLPFEPEAMRRLGGPPTTFVGHRLSVDPEVLAAR 180

Query: 176 KLAARQLLGLDEQRRWLAVLPGSRGSEMKMLAEPFIATCQKLQARYPDLGFVVALVNAKR 235
           +  A + L    Q R + +LPGSR +E   L EPF    +    R     F++  V  + 
Sbjct: 181 QKRADRPLPEQGQPRTILLLPGSRSTETTRLMEPFQDAAKAFVERNGPTRFLLPTVPRQE 240

Query: 236 RAQFEQA--W-QQVAPELNFVLVDDTAR-NVITAADAVMLASGTVALECMLLKRPMVVGY 291
               E A  W   + PE+    +D   +      ADA + ASGTV LE  L   P +  Y
Sbjct: 241 HRIREMAAMWPDDIRPEIG---IDSAFKWKAFAEADAAIAASGTVILELALAGVPTISVY 297

Query: 292 RVNAFTAFLAKRLLKTPYVSLPNILAGEELVKELLQDHCTVDNLYHEVSRLLE--SDNQA 349
           + +     L+KR +KT   +LPN++A   ++ E   +     ++     RL    ++ +A
Sbjct: 298 KTDWIFTMLSKR-VKTWTGALPNLIADYAIIPEYFNEVVRSGSMLRWAERLSSDTTERRA 356

Query: 350 LMDKFTEMHQWIRKD 364
           +++ +  + Q +  D
Sbjct: 357 MLEGYALVQQRLHTD 371