Pairwise Alignments

Query, 1159 a.a., DNA polymerase III subunit alpha from Vibrio cholerae E7946 ATCC 55056

Subject, 208 a.a., DNA polymerase III alpha subunit (EC 2.7.7.7) from Variovorax sp. SCN45

 Score =  145 bits (367), Expect = 2e-39
 Identities = 80/212 (37%), Positives = 122/212 (57%), Gaps = 4/212 (1%)

Query: 1   MSDPKFIHLRIHSDFSMVDGLSKVPPLVKKVAAMGMPAMALTDFTNLCGLVKFYSTAHNC 60
           MS P F+HL +HS++S+ D   ++  LVK+  A+G PA+ALTD  N+   VKFY      
Sbjct: 1   MSAP-FVHLHLHSEYSLADSTLRIGELVKRCVALGQPAVALTDLDNIFAAVKFYKACEGA 59

Query: 61  GVKPIIGADFTLQSEEFGDELTKLTLLAKNNVGYKNLTLLISKAYLRGHVQHQPVIDKAW 120
           G+KPIIGAD  L   +  +  ++LTLL ++  GY +L+ L+S+A++ GH     V+   W
Sbjct: 60  GIKPIIGADVHL--ADGNESASRLTLLCRDRGGYLSLSRLLSRAWMEGHRTEGVVLRPEW 117

Query: 121 LVEHAEGLIVLSGGKSGEVGRALLKGNQQQVERCIEFYQTHFADHFYLELIRTGRADEES 180
           L E  +GL  L+ G++    R      ++     +  +Q  F D  +LEL RT R  E++
Sbjct: 118 LREDNDGLFALA-GRNSLAARLAASNREELAHAWLVDWQGVFGDRLHLELTRTQRDGEDA 176

Query: 181 YLHFALDVAEQYDLPVVATNEVVFITEESFEA 212
           +  FAL  A +  LPVVA+N+  F+  + FEA
Sbjct: 177 FNAFALQAASKRGLPVVASNDARFLDRDGFEA 208