Pairwise Alignments

Query, 1159 a.a., DNA polymerase III subunit alpha from Vibrio cholerae E7946 ATCC 55056

Subject, 1207 a.a., DNA polymerase III subunit alpha from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  751 bits (1939), Expect = 0.0
 Identities = 440/1161 (37%), Positives = 667/1161 (57%), Gaps = 100/1161 (8%)

Query: 4    PKFIHLRIHSDFSMVDGLSKVPPLVKKVAAMGMPAMALTDFTNLCGLVKFYSTAHNCGVK 63
            P F HL  H+ +S++DG + +  L+KK  A GMPA+A+TD  N+     F + A+   VK
Sbjct: 2    PVFSHLHTHTQYSLLDGQASISALMKKAQADGMPAVAMTDHGNMFAAFNFVAEANKYNVK 61

Query: 64   PIIGADFTLQ--------SEEFGDELTKLTLLAKNNVGYKNLTLLISKAYLRGHVQHQPV 115
            PI+G +F L         S+E  D      LLAK+  GY+NL  L S +Y+ G     P 
Sbjct: 62   PIVGCEFYLVKDRHLKTFSKEVKDVRHHQLLLAKDQEGYQNLAKLCSLSYIEGVYSKWPR 121

Query: 116  IDKAWLVEHAEGLIVLSGGKSGEVGRALLKGNQQQVERCIEFYQTHFADHFYLELIRTGR 175
            IDK  L+++++GLI  S     EV +A+L  ++++ E   +++   F + +Y+E+ R G 
Sbjct: 122  IDKELLLKYSKGLIATSCCIGAEVPQAILWKSEEEAEEIFKWWLDVFGEDYYIEIQRHGL 181

Query: 176  AD-------EESYLHFALDVAEQYDLPVVATNEVVFITEESFEAHEIRVAIHDGY----- 223
             +       +E      L  A++Y++ V+ TN+  ++ +E + AH+I + ++ G      
Sbjct: 182  QNIDGTGKSQEDINQVLLKWAKKYNVKVICTNDSHYVDQEDWNAHDILLCVNTGEDQSTP 241

Query: 224  ---------------------TLEDPR-RPKNYS-------------PKQ---------Y 239
                                 T+E+ R +  N+S             PK          Y
Sbjct: 242  VGDFQTKYYRFLSDDQKVIYDTVENVRSKYSNHSTVRQMLNRIDEAGPKTRFGFPNDQFY 301

Query: 240  LRSEAEMCELFADIPEALANSVEIAKRCNVTVRLGEYFLPNFPTGG--MAIEDFLVMKSR 297
             +++AEM ELF D+PEA+ N+ EI  +        +  LPNFP        + FL   + 
Sbjct: 302  FKTQAEMNELFKDVPEAVDNTNEIVDKITPPKLKRDILLPNFPIPPEHAGPDAFLRHLTY 361

Query: 298  EGLEERLEFLFPDPEVRAKRRPEYDERLQVELDVINQMGFPGYFLIVMEFIQWSKDNDIP 357
            EG ++R   + PD E          ERL  EL +I  MGF GYFLIV +FI   +D  + 
Sbjct: 362  EGAKKRYTDITPDVE----------ERLDYELRIIETMGFAGYFLIVQDFINRGRDMGVF 411

Query: 358  VGPGRGSGAGSLVAYALKITDLDPLEYDLLFERFLNPERVSMPDFDVDFCMDKRDQVIDH 417
            VGPGRGS AGS VAY + IT++DP++Y+LLFERFLNPERVSMPD D+DF    R +VID+
Sbjct: 412  VGPGRGSAAGSAVAYCIGITNIDPIKYNLLFERFLNPERVSMPDIDIDFDDVNRQRVIDY 471

Query: 418  VAEMYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPFGFVDRISKLVPPDPGMTLEKAFIA 477
            V + YG+  V+QIITFGTMAAK+ I+DV R    P    + ++K+VP  PG TL KAF+ 
Sbjct: 472  VVDKYGKTQVAQIITFGTMAAKSSIKDVARSTSLPLAEANELAKMVPDTPGTTLAKAFME 531

Query: 478  EPALQELYDADEEVKELIDKCRILEGCTRNAGKHAGGVVISPTAITDFAPIYCDAEGNFP 537
               L  + +  +    ++     LEG  RN G HA GV+I+P  IT++ P+    + +  
Sbjct: 532  NLDLAAIREGTDHRAAVLKLAEKLEGSVRNTGIHAAGVIIAPDDITNYIPVSTSKDADLL 591

Query: 538  VTQFDKNDVETAGLVKFDFLGLRTLTIIDWALGLVNPRLKKAGKPPVRIEAIPLDDARSF 597
            VTQFD   +E+AG++K DFLGL+TLTII  AL L+    KK     + I+ IP+DD +++
Sbjct: 592  VTQFDGKVIESAGMLKMDFLGLKTLTIIKDALELI----KKNHGVEIDIDEIPIDDEKTY 647

Query: 598  RNLQDAKTTAVFQLESRGMKELIKRLQPDCFEDIIALVALFRPGPLQSGMVDNFIDRKHG 657
            +  Q   T   FQ ES GM+  +K LQP   ED+IA+ AL+RPGP+Q   + NFI+RKHG
Sbjct: 648  QLYQRGDTIGTFQFESEGMRMYLKDLQPTNIEDLIAMNALYRPGPMQ--FIPNFINRKHG 705

Query: 658  REAISYPDEKWQHESLKEILEPTYGIILYQEQVMQIAQVLSGYTLGGADMLRRAMGKKKP 717
            RE + YP     HE L+ IL  +YGI++YQEQ+MQ AQ+L+GY+LGGAD+LRRAMGKK  
Sbjct: 706  REDVEYP-----HELLEPILNYSYGIMVYQEQIMQTAQILAGYSLGGADLLRRAMGKKDM 760

Query: 718  EEMAKQRAVFQEG-AEKNGVDGELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKT 776
            ++MA++R  F  G AE + +  + A ++FD++EKFA YGFN+SHSAAY++V+YQT +LK 
Sbjct: 761  KKMAEEREKFIAGAAEIHKIPSKKASEVFDVMEKFAQYGFNRSHSAAYSVVAYQTGYLKA 820

Query: 777  HYPAEFMAAVMTADMDNTEKVVGLVDECKNMGLTVLPPDINSGLYRFNVDDNGAIVYGIG 836
            HYPAE+MAAV+T +M++ +KV   ++E +  G+ VL PD+N  L +FNV++ G I +G+ 
Sbjct: 821  HYPAEYMAAVLTNNMNDIKKVTFFIEEARKQGVAVLGPDVNESLLKFNVNEQGQIRFGLA 880

Query: 837  AIKGVGEGPIEAILEARNKGGYFKDLFDFCARIDLKKVNKRVIEKLILAGALDRLG-PHR 895
            AIKG GE  ++AI+  R   G ++D+FDF  R++L+ VNK+  E + LAG  D     HR
Sbjct: 881  AIKGTGESAVDAIISEREANGMYQDIFDFSKRVNLRAVNKKTFESMALAGCFDSWELYHR 940

Query: 896  AAM--------MASVDDAVRAASQHHQAEAFGQADMFGVLTDAPEEVEQKYTQVPEWPEK 947
            A +        M+ ++ AVR  + +   +   Q  +FG  + A      K  +V  W + 
Sbjct: 941  AQLMEVPEGESMSLLEKAVRYGNNYQAEQQAAQQSLFGG-SAAVAAPMPKIPEVQPWTQA 999

Query: 948  VRLEGERETLGLYLTGHPVDEYLKELTKYTSCRLNEAAPTRRDQSLTVAGLVIAARVMTT 1007
              L  E+E +G Y++GHP+D++  E+  Y +C L+      +++ + VAG+V    + T 
Sbjct: 1000 EMLRREKEVVGFYMSGHPLDQFKLEIDSYCTCALSN-IEEYKNRDVNVAGMVTDVVIRTA 1058

Query: 1008 KRGTRIGLMTLDDRSGRMEVMLYSEALDRYAEWLEKDKILVVSGQVSFD-DFNGGLKMSA 1066
            K G    L T++D    M++ L+ E   +++ +L+    L + G+V          ++  
Sbjct: 1059 KNGNPFALFTIEDYDTTMQMALFGEDYVKFSPYLKIGLYLFIRGKVQLRYKTEDQWELKP 1118

Query: 1067 REVMDLGSAREKFARGLSISI 1087
            + +  LG   +K A+G+ ++I
Sbjct: 1119 QNIQLLGDVMDKMAQGVQLNI 1139