Pairwise Alignments

Query, 1159 a.a., DNA polymerase III subunit alpha from Vibrio cholerae E7946 ATCC 55056

Subject, 1144 a.a., DNA polymerase III alpha subunit (EC 2.7.7.7) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 1785 bits (4622), Expect = 0.0
 Identities = 867/1144 (75%), Positives = 996/1144 (87%), Gaps = 1/1144 (0%)

Query: 17   MVDGLSKVPPLVKKVAAMGMPAMALTDFTNLCGLVKFYSTAHNCGVKPIIGADFTLQSEE 76
            M+DGL+K  PLVKK A++GMPA+A+TDFTNLCGLVKFY   H  G+KPI+GADF + +E 
Sbjct: 1    MIDGLAKTGPLVKKAASLGMPALAITDFTNLCGLVKFYGAGHGAGIKPIVGADFNVHNEL 60

Query: 77   FGDELTKLTLLAKNNVGYKNLTLLISKAYLRGHVQHQPVIDKAWLVEHAEGLIVLSGGKS 136
             GDELT LT+LA NN GY+NLTLLISKAY RG+    P+I++ WLVE  EGLI+LSGG+ 
Sbjct: 61   LGDELTHLTVLAANNTGYQNLTLLISKAYQRGYGAAGPIIERDWLVELKEGLILLSGGRM 120

Query: 137  GEVGRALLKGNQQQVERCIEFYQTHFADHFYLELIRTGRADEESYLHFALDVAEQYDLPV 196
            G+VGR LL+GNQ  VE C+ FY+ HF D ++LELIRTGR DEE+YLH A+++AE   LPV
Sbjct: 121  GDVGRCLLRGNQALVEECVAFYEAHFPDRYFLELIRTGRQDEETYLHAAVELAEARGLPV 180

Query: 197  VATNEVVFITEESFEAHEIRVAIHDGYTLEDPRRPKNYSPKQYLRSEAEMCELFADIPEA 256
            VATN+V F+  + F+AHEIRVAIHDG+TL+DP+RP+NYSP+QY+RSE EMCELF+DIPEA
Sbjct: 181  VATNDVRFLESDDFDAHEIRVAIHDGFTLDDPKRPRNYSPQQYMRSEEEMCELFSDIPEA 240

Query: 257  LANSVEIAKRCNVTVRLGEYFLPNFPTGGMAIEDFLVMKSREGLEERLEFLFPDPEVRAK 316
            L N+VEIAKRCNVTVRLGEYFLP FPTG M  ED+LV K++EGLEERL FLFPD E R K
Sbjct: 241  LENTVEIAKRCNVTVRLGEYFLPQFPTGDMTTEDYLVKKAKEGLEERLAFLFPDEEERKK 300

Query: 317  RRPEYDERLQVELDVINQMGFPGYFLIVMEFIQWSKDNDIPVGPGRGSGAGSLVAYALKI 376
            RRPEYDERL +EL VINQMGFPGYFLIVMEFIQWSKDN +PVGPGRGSGAGSLVAYALKI
Sbjct: 301  RRPEYDERLDIELQVINQMGFPGYFLIVMEFIQWSKDNGVPVGPGRGSGAGSLVAYALKI 360

Query: 377  TDLDPLEYDLLFERFLNPERVSMPDFDVDFCMDKRDQVIDHVAEMYGRDAVSQIITFGTM 436
            TDLDPLE+DLLFERFLNPERVSMPDFDVDFCM+KRDQVI+HVA+MYGRDAVSQIITFGTM
Sbjct: 361  TDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDQVIEHVADMYGRDAVSQIITFGTM 420

Query: 437  AAKAVIRDVGRVLGHPFGFVDRISKLVPPDPGMTLEKAFIAEPALQELYDADEEVKELID 496
            AAKAVIRDVGRVLGHP+GFVDRISKLVPPDPGMTL KAF AEP L E+Y+ADEEV+ LID
Sbjct: 421  AAKAVIRDVGRVLGHPYGFVDRISKLVPPDPGMTLAKAFEAEPQLPEIYEADEEVRALID 480

Query: 497  KCRILEGCTRNAGKHAGGVVISPTAITDFAPIYCDAEGNFPVTQFDKNDVETAGLVKFDF 556
              R LEG TRNAGKHAGGVVI+PT ITDFAP+YCD EG  PVTQFDK+DVE AGLVKFDF
Sbjct: 481  MARKLEGVTRNAGKHAGGVVIAPTKITDFAPLYCDEEGKHPVTQFDKSDVEYAGLVKFDF 540

Query: 557  LGLRTLTIIDWALGLVNPRLKKAGKPPVRIEAIPLDDARSFRNLQDAKTTAVFQLESRGM 616
            LGLRTLTII+WAL ++N R  K G+PP+ I AIPLDD +SF  LQ ++TTAVFQLESRGM
Sbjct: 541  LGLRTLTIINWALEMINKRRAKNGEPPLDIAAIPLDDKKSFDMLQRSETTAVFQLESRGM 600

Query: 617  KELIKRLQPDCFEDIIALVALFRPGPLQSGMVDNFIDRKHGREAISYPDEKWQHESLKEI 676
            K+LIKRLQPDCFED+IALVALFRPGPLQSGMVDNFIDRKHGRE +SYPD +WQHESLK +
Sbjct: 601  KDLIKRLQPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREELSYPDVQWQHESLKPV 660

Query: 677  LEPTYGIILYQEQVMQIAQVLSGYTLGGADMLRRAMGKKKPEEMAKQRAVFQEGAEKNGV 736
            LEPTYGIILYQEQVMQIAQVLSGYTLGGADMLRRAMGKKKPEEMAKQR+VF+EGA+KNG+
Sbjct: 661  LEPTYGIILYQEQVMQIAQVLSGYTLGGADMLRRAMGKKKPEEMAKQRSVFEEGAKKNGI 720

Query: 737  DGELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKTHYPAEFMAAVMTADMDNTEK 796
            DGELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLK HYPAEFMAAVMTADMDNTEK
Sbjct: 721  DGELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPAEFMAAVMTADMDNTEK 780

Query: 797  VVGLVDECKNMGLTVLPPDINSGLYRFNVDDNGAIVYGIGAIKGVGEGPIEAILEARNKG 856
            VVGLVDEC  MGL +LPPDINSGLY F+V+D G IVYGIGAIKGVGEGPIEAI++ARN+G
Sbjct: 781  VVGLVDECWRMGLKILPPDINSGLYHFHVNDEGEIVYGIGAIKGVGEGPIEAIIDARNQG 840

Query: 857  GYFKDLFDFCARIDLKKVNKRVIEKLILAGALDRLGPHRAAMMASVDDAVRAASQHHQAE 916
            GYF++LFD CAR D KK+N+RV+EKLI++GA DRLGPHRAA+M S+ DA++AA QH +AE
Sbjct: 841  GYFRELFDLCARTDTKKLNRRVLEKLIMSGAFDRLGPHRAALMNSLGDALKAADQHAKAE 900

Query: 917  AFGQADMFGVLTDAPEEVEQKYTQVPEWPEKVRLEGERETLGLYLTGHPVDEYLKELTKY 976
            A GQ DMFGVL + PE++EQ Y     WPE+V L+GERETLGLYLTGHP+++YLKE+ +Y
Sbjct: 901  AIGQTDMFGVLAEEPEQIEQSYASCQPWPEQVVLDGERETLGLYLTGHPINQYLKEIERY 960

Query: 977  T-SCRLNEAAPTRRDQSLTVAGLVIAARVMTTKRGTRIGLMTLDDRSGRMEVMLYSEALD 1035
                RL +  PT R +  T AGLVIAARVM TKRG RIG+ TLDDRSGR+EVML+++ALD
Sbjct: 961  VGGVRLKDMHPTERGKVTTAAGLVIAARVMVTKRGNRIGICTLDDRSGRLEVMLFTDALD 1020

Query: 1036 RYAEWLEKDKILVVSGQVSFDDFNGGLKMSAREVMDLGSAREKFARGLSISILQSQIDQQ 1095
            +Y + LEKD+IL+VSGQVSFDDF+GGLKM+AREVMD+  AREK+ARGL+IS+   QID Q
Sbjct: 1021 KYQQLLEKDRILIVSGQVSFDDFSGGLKMTAREVMDIDEAREKYARGLAISLTDRQIDDQ 1080

Query: 1096 FFERFSHILEPHRAGTVPVNVYYQRPDARARLTLGTEWRVTPSDTLLDELKQLLGHDQVE 1155
               R    LEPHR+GT+PV++YYQR DARARL  G  WRV+PSD LL++L+ L+G +QVE
Sbjct: 1081 LLNRLRQSLEPHRSGTIPVHLYYQRADARARLRFGATWRVSPSDRLLNDLRGLIGSEQVE 1140

Query: 1156 LEFN 1159
            LEF+
Sbjct: 1141 LEFD 1144