Pairwise Alignments

Query, 1159 a.a., DNA polymerase III subunit alpha from Vibrio cholerae E7946 ATCC 55056

Subject, 1160 a.a., DNA polymerase III subunit alpha from Erwinia tracheiphila SCR3

 Score = 1785 bits (4622), Expect = 0.0
 Identities = 871/1160 (75%), Positives = 1007/1160 (86%), Gaps = 1/1160 (0%)

Query: 1    MSDPKFIHLRIHSDFSMVDGLSKVPPLVKKVAAMGMPAMALTDFTNLCGLVKFYSTAHNC 60
            M++P+FIHLR+HSD+SMVDGL+K  PLVKK AAMGMPA+A+TDFTNLCGLVKFY TAH  
Sbjct: 1    MAEPRFIHLRVHSDYSMVDGLAKTAPLVKKAAAMGMPAIAITDFTNLCGLVKFYGTAHGQ 60

Query: 61   GVKPIIGADFTLQSEEFGDELTKLTLLAKNNVGYKNLTLLISKAYLRGHVQHQPVIDKAW 120
            G+KPIIGADF +  +  GDE ++LT+LA NN GY+NLTLLIS+AY RG+    PVID+ W
Sbjct: 61   GIKPIIGADFNVACDALGDEFSQLTILAANNQGYQNLTLLISRAYQRGYGAAGPVIDRDW 120

Query: 121  LVEHAEGLIVLSGGKSGEVGRALLKGNQQQVERCIEFYQTHFADHFYLELIRTGRADEES 180
            L E  EGLI+LSGG+ G+VGR  L+ N  QV+ C+ FYQ +F D +YLEL RTGR DEE+
Sbjct: 121  LTEMQEGLILLSGGRRGDVGRMQLRCNTAQVKECLAFYQQYFPDRYYLELTRTGRPDEET 180

Query: 181  YLHFALDVAEQYDLPVVATNEVVFITEESFEAHEIRVAIHDGYTLEDPRRPKNYSPKQYL 240
            +LH A+++A    LPVVATNEV F+ E  F+AHEIRVAIHDG+TL+DP+RP+ YSP+QYL
Sbjct: 181  WLHAAVELAISEGLPVVATNEVCFLEESDFDAHEIRVAIHDGFTLDDPKRPRLYSPQQYL 240

Query: 241  RSEAEMCELFADIPEALANSVEIAKRCNVTVRLGEYFLPNFPTGGMAIEDFLVMKSREGL 300
            RSE EMCELF+DIPEAL NSVEIA+RCNVT+RLGEYFLP FPTG M  EDFLVMKSREGL
Sbjct: 241  RSEEEMCELFSDIPEALENSVEIARRCNVTIRLGEYFLPQFPTGDMTTEDFLVMKSREGL 300

Query: 301  EERLEFLFPDPEVRAKRRPEYDERLQVELDVINQMGFPGYFLIVMEFIQWSKDNDIPVGP 360
            EERL FLFPD  VRA++RPEYD RL+VEL+VINQMGFPGYFLIVMEFIQWSKDN +PVGP
Sbjct: 301  EERLAFLFPDATVRAEKRPEYDRRLEVELNVINQMGFPGYFLIVMEFIQWSKDNSVPVGP 360

Query: 361  GRGSGAGSLVAYALKITDLDPLEYDLLFERFLNPERVSMPDFDVDFCMDKRDQVIDHVAE 420
            GRGSGAGSLVAYALKITDLDPLE+DLLFERFLNPERVSMPDFDVDFCM+KRD VI+HVAE
Sbjct: 361  GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDLVIEHVAE 420

Query: 421  MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPFGFVDRISKLVPPDPGMTLEKAFIAEPA 480
            MYGR AVSQIITFGTMAAKAVIRDVGRVLGHP+GFVDRISKLVPPDPGMTLEKAF AEP 
Sbjct: 421  MYGRKAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPPDPGMTLEKAFAAEPQ 480

Query: 481  LQELYDADEEVKELIDKCRILEGCTRNAGKHAGGVVISPTAITDFAPIYCDAEGNFPVTQ 540
            L E+Y+ADEEVK LID  R LEG TRNAGKHAGGVVI+PT ITDFAP+YCD  G  PVTQ
Sbjct: 481  LPEIYEADEEVKALIDMARKLEGVTRNAGKHAGGVVIAPTQITDFAPLYCDEHGQHPVTQ 540

Query: 541  FDKNDVETAGLVKFDFLGLRTLTIIDWALGLVNPRLKKAGKPPVRIEAIPLDDARSFRNL 600
            FDKNDVE AGLVKFDFLGLRTLTIIDWAL ++N R +K G+PP+ I AIPL+D +SF  L
Sbjct: 541  FDKNDVEYAGLVKFDFLGLRTLTIIDWALAMINARREKRGEPPLDIAAIPLNDKKSFDML 600

Query: 601  QDAKTTAVFQLESRGMKELIKRLQPDCFEDIIALVALFRPGPLQSGMVDNFIDRKHGREA 660
            Q ++TTAVFQLESRGMK+LIKRL+PDCFED+IALVALFRPGPLQSGMVDNFIDRKHGREA
Sbjct: 601  QRSETTAVFQLESRGMKDLIKRLKPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREA 660

Query: 661  ISYPDEKWQHESLKEILEPTYGIILYQEQVMQIAQVLSGYTLGGADMLRRAMGKKKPEEM 720
            ISYPD +WQHESL+ +LEPTYGIILYQEQVMQIAQVL+GY+LGGADMLRRAMGKK P EM
Sbjct: 661  ISYPDIEWQHESLQPVLEPTYGIILYQEQVMQIAQVLAGYSLGGADMLRRAMGKKNPVEM 720

Query: 721  AKQRAVFQEGAEKNGVDGELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKTHYPA 780
            AKQR  F++GA+  GVDGELA+KIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLK HYPA
Sbjct: 721  AKQRGGFEDGAKARGVDGELAVKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA 780

Query: 781  EFMAAVMTADMDNTEKVVGLVDECKNMGLTVLPPDINSGLYRFNVDDNGAIVYGIGAIKG 840
            EFMAAVMTADMDNTEKVVGLVDEC  MGL VLPPDINSGLY F+V+D G IVYGIGAIKG
Sbjct: 781  EFMAAVMTADMDNTEKVVGLVDECWRMGLRVLPPDINSGLYPFHVNDEGEIVYGIGAIKG 840

Query: 841  VGEGPIEAILEARNKGGYFKDLFDFCARIDLKKVNKRVIEKLILAGALDRLGPHRAAMMA 900
            VGEGPIEAILEAR++GGYF++LFD CAR + KK+N+RV+EKLI++GA DRLGPHRAA+M+
Sbjct: 841  VGEGPIEAILEARSQGGYFRELFDLCARTETKKLNRRVLEKLIMSGAFDRLGPHRAALMS 900

Query: 901  SVDDAVRAASQHHQAEAFGQADMFGVLTDAPEEVEQKYTQVPEWPEKVRLEGERETLGLY 960
            ++ DA++AA QH +AEA GQ DMFGVL +APE++EQ Y  V  WPE+V+L+GERETLGLY
Sbjct: 901  ALSDALKAADQHAKAEATGQTDMFGVLAEAPEQIEQSYADVAYWPEQVQLDGERETLGLY 960

Query: 961  LTGHPVDEYLKELTKYT-SCRLNEAAPTRRDQSLTVAGLVIAARVMTTKRGTRIGLMTLD 1019
            LTGHP+++YLKE+ +Y    RL +  PT+R + +  AGLVIAARVM TKRG RIG+ TLD
Sbjct: 961  LTGHPINQYLKEIERYVGGMRLKDMHPTKRGEVIMAAGLVIAARVMVTKRGNRIGICTLD 1020

Query: 1020 DRSGRMEVMLYSEALDRYAEWLEKDKILVVSGQVSFDDFNGGLKMSAREVMDLGSAREKF 1079
            DRSGR+E+ML+++AL+++   LEKD+IL+VSGQVSFDDF+GGLKM+AR+VMD+  AREK+
Sbjct: 1021 DRSGRLEIMLFTDALEKFQHLLEKDRILIVSGQVSFDDFSGGLKMTARDVMDIDEAREKY 1080

Query: 1080 ARGLSISILQSQIDQQFFERFSHILEPHRAGTVPVNVYYQRPDARARLTLGTEWRVTPSD 1139
            ARGL+IS+   QID Q   R    LEPHR+GT+PV +YYQR DARARL  G  WRV+PSD
Sbjct: 1081 ARGLAISLTDRQIDDQLLNRLRQSLEPHRSGTIPVYLYYQREDARARLRFGVAWRVSPSD 1140

Query: 1140 TLLDELKQLLGHDQVELEFN 1159
             LL+EL+ L+G +QVELEF+
Sbjct: 1141 RLLNELRLLIGTEQVELEFD 1160