Pairwise Alignments

Query, 1159 a.a., DNA polymerase III subunit alpha from Vibrio cholerae E7946 ATCC 55056

Subject, 1160 a.a., DNA polymerase III subunit alpha from Dickeya dianthicola ME23

 Score = 1812 bits (4693), Expect = 0.0
 Identities = 880/1160 (75%), Positives = 1015/1160 (87%), Gaps = 1/1160 (0%)

Query: 1    MSDPKFIHLRIHSDFSMVDGLSKVPPLVKKVAAMGMPAMALTDFTNLCGLVKFYSTAHNC 60
            M++P+F+HLR+HSD+SM+DGL+K  PLVKK AA+GMPA+A+TDFTNLCGLVKFY  AH  
Sbjct: 1    MAEPRFVHLRVHSDYSMIDGLAKTGPLVKKAAALGMPALAITDFTNLCGLVKFYGGAHGA 60

Query: 61   GVKPIIGADFTLQSEEFGDELTKLTLLAKNNVGYKNLTLLISKAYLRGHVQHQPVIDKAW 120
            G+KPIIGADF LQSEE GDEL  LT+LA NN GY+NLTLLIS+AY RG+    P ID+AW
Sbjct: 61   GIKPIIGADFYLQSEELGDELAHLTILAMNNEGYQNLTLLISRAYQRGYGAAGPTIDRAW 120

Query: 121  LVEHAEGLIVLSGGKSGEVGRALLKGNQQQVERCIEFYQTHFADHFYLELIRTGRADEES 180
            LVEH  GL++LSGG+ G++G+ LL+GNQ  VE+ + FYQ HF   FYLEL+RTGR DEES
Sbjct: 121  LVEHQAGLLLLSGGRHGDIGKFLLRGNQVLVEQSVAFYQQHFPQRFYLELVRTGRPDEES 180

Query: 181  YLHFALDVAEQYDLPVVATNEVVFITEESFEAHEIRVAIHDGYTLEDPRRPKNYSPKQYL 240
            YLH A+ +A  + LPVVATN+V FI+++ FEAHEIRVAIHDG+TL+DP+RP+NYS KQYL
Sbjct: 181  YLHAAIALATAHGLPVVATNDVCFISQDDFEAHEIRVAIHDGFTLDDPKRPRNYSVKQYL 240

Query: 241  RSEAEMCELFADIPEALANSVEIAKRCNVTVRLGEYFLPNFPTGGMAIEDFLVMKSREGL 300
            RSE EMCELFADIPEAL N+VEIAKRCNVT+RLGEYFLP FPTG M+ ED+LVM SR+GL
Sbjct: 241  RSEEEMCELFADIPEALINTVEIAKRCNVTIRLGEYFLPQFPTGDMSTEDYLVMCSRKGL 300

Query: 301  EERLEFLFPDPEVRAKRRPEYDERLQVELDVINQMGFPGYFLIVMEFIQWSKDNDIPVGP 360
            EERL FLFPD  VRA+RRPEYDERL++EL+VINQMGFPGYFLIVMEFIQWSKDND+PVGP
Sbjct: 301  EERLTFLFPDEAVRAQRRPEYDERLEIELNVINQMGFPGYFLIVMEFIQWSKDNDVPVGP 360

Query: 361  GRGSGAGSLVAYALKITDLDPLEYDLLFERFLNPERVSMPDFDVDFCMDKRDQVIDHVAE 420
            GRGSGAGSLVAYAL ITDLDPLE+DLLFERFLNPERVSMPDFDVDFCM+KRD VIDHVA+
Sbjct: 361  GRGSGAGSLVAYALNITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDLVIDHVAD 420

Query: 421  MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPFGFVDRISKLVPPDPGMTLEKAFIAEPA 480
            MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHP+GFVDRISKLVPPDPGMTLEKAF AEP 
Sbjct: 421  MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPPDPGMTLEKAFAAEPQ 480

Query: 481  LQELYDADEEVKELIDKCRILEGCTRNAGKHAGGVVISPTAITDFAPIYCDAEGNFPVTQ 540
            L E+Y+ADEEVK LID  R LEG TRNAGKHAGGVVISPT ITDFAP+YCD EGN PVTQ
Sbjct: 481  LGEIYEADEEVKALIDMARKLEGVTRNAGKHAGGVVISPTKITDFAPLYCDPEGNHPVTQ 540

Query: 541  FDKNDVETAGLVKFDFLGLRTLTIIDWALGLVNPRLKKAGKPPVRIEAIPLDDARSFRNL 600
            FDK+DVE AGLVKFDFLGLRTLTII+WAL ++N R  K G  PV I AIPL D +SF  L
Sbjct: 541  FDKSDVEYAGLVKFDFLGLRTLTIINWALEMINARRGKQGLEPVDIAAIPLQDKKSFDML 600

Query: 601  QDAKTTAVFQLESRGMKELIKRLQPDCFEDIIALVALFRPGPLQSGMVDNFIDRKHGREA 660
            Q ++TTAVFQLESRGMK+LIKRL+PDCFED+IALVALFRPGPLQSGMVDNFIDRKHGREA
Sbjct: 601  QRSETTAVFQLESRGMKDLIKRLKPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREA 660

Query: 661  ISYPDEKWQHESLKEILEPTYGIILYQEQVMQIAQVLSGYTLGGADMLRRAMGKKKPEEM 720
            ISYPD +WQHE+LK +LEPTYGIILYQEQVMQIAQVL+GYTLGGADMLRRAMGKKKPEEM
Sbjct: 661  ISYPDIQWQHETLKPVLEPTYGIILYQEQVMQIAQVLAGYTLGGADMLRRAMGKKKPEEM 720

Query: 721  AKQRAVFQEGAEKNGVDGELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKTHYPA 780
            AKQR+VF+EGAEK GVDGEL+MKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLK HYPA
Sbjct: 721  AKQRSVFKEGAEKMGVDGELSMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA 780

Query: 781  EFMAAVMTADMDNTEKVVGLVDECKNMGLTVLPPDINSGLYRFNVDDNGAIVYGIGAIKG 840
            EFMAAVMTADMDNT+K+VGLVDEC  +GL +LPPDINSGLY F+V+D G IVYGIGAIKG
Sbjct: 781  EFMAAVMTADMDNTDKIVGLVDECWRIGLKILPPDINSGLYHFHVNDEGEIVYGIGAIKG 840

Query: 841  VGEGPIEAILEARNKGGYFKDLFDFCARIDLKKVNKRVIEKLILAGALDRLGPHRAAMMA 900
            VGEGPIEAI+EARN  GYF+DLFD CAR D+KK+N+RV+EKLI++GA DRLGPHRAA+M 
Sbjct: 841  VGEGPIEAIIEARNNDGYFRDLFDLCARTDIKKLNRRVLEKLIMSGAFDRLGPHRAALMN 900

Query: 901  SVDDAVRAASQHHQAEAFGQADMFGVLTDAPEEVEQKYTQVPEWPEKVRLEGERETLGLY 960
            S+ DA+++A QH +AEA GQADMFGVL + PE+VEQ Y+ VP WPE+V L+GERETLGLY
Sbjct: 901  SLADAMKSAEQHAKAEAIGQADMFGVLAETPEQVEQSYSTVPPWPEQVVLDGERETLGLY 960

Query: 961  LTGHPVDEYLKELTKYT-SCRLNEAAPTRRDQSLTVAGLVIAARVMTTKRGTRIGLMTLD 1019
            LTGHP+++YLKE+ +Y    RL +  PT R +  T  GLV+AARVM TKRG RIG+ TLD
Sbjct: 961  LTGHPINQYLKEIERYAGGVRLKDMHPTERGKMTTAVGLVLAARVMVTKRGNRIGVCTLD 1020

Query: 1020 DRSGRMEVMLYSEALDRYAEWLEKDKILVVSGQVSFDDFNGGLKMSAREVMDLGSAREKF 1079
            DRSGR+EVML+++AL++Y   LE+D+IL+ SGQVSFDDF+GGLKM+ RE+MD+  AREK+
Sbjct: 1021 DRSGRLEVMLFTDALEKYQHLLEQDRILIASGQVSFDDFSGGLKMTVRELMDISEAREKY 1080

Query: 1080 ARGLSISILQSQIDQQFFERFSHILEPHRAGTVPVNVYYQRPDARARLTLGTEWRVTPSD 1139
            ARGL+IS+   QID Q   R    LEPHR+GT+PV++YYQR DARARL  G  WR+TP+D
Sbjct: 1081 ARGLAISLTDRQIDDQLLNRLRQSLEPHRSGTIPVHLYYQRQDARARLRFGAAWRITPTD 1140

Query: 1140 TLLDELKQLLGHDQVELEFN 1159
             LL++L+ L+G++QVELEF+
Sbjct: 1141 GLLNDLRTLVGNEQVELEFD 1160