Pairwise Alignments

Query, 1159 a.a., DNA polymerase III subunit alpha from Vibrio cholerae E7946 ATCC 55056

Subject, 1188 a.a., DNA polymerase III subunit alpha from Acinetobacter radioresistens SK82

 Score = 1118 bits (2892), Expect = 0.0
 Identities = 597/1175 (50%), Positives = 796/1175 (67%), Gaps = 52/1175 (4%)

Query: 5    KFIHLRIHSDFSMVDGLSKVPPLVKKVAAMGMPAMALTDFTNLCGLVKFYSTAHNCGVKP 64
            +F+HL IH++FS+ + + +VP LVK      MPA+ALTD +NL   VKFY      G+KP
Sbjct: 2    QFVHLGIHTEFSITESIVRVPDLVKAAQKDEMPALALTDLSNLHAAVKFYGKCLGKGIKP 61

Query: 65   IIGADFTLQSEEFGDELTKLTLLAKNNVGYKNLTLLISKAYLRGHVQHQPVIDKAWLVEH 124
            I+G++  L   E      ++TLLA  N G++NLT L+S+ Y+RG     P + K W+++ 
Sbjct: 62   ILGSEIRLNDAEH-----RMTLLAMTNTGWRNLTELVSEGYIRGQQLDIPCVQKEWILDQ 116

Query: 125  AEGLIVLSGGKSGEVGRALLKGNQQQVERCIEFYQTHFADHFYLELIRTGRADEESYLHF 184
             + LI L G  S +VG+ L+  N Q+ E  +E +   F +  YL L RT R  E+ ++  
Sbjct: 117  NQDLIALLGMNS-DVGKMLITSNPQKAEPLLEEWIAKFGNRVYLALTRTNRPGEDDFIIE 175

Query: 185  ALDVAEQYDLPVVATNEVVFITEESFEAHEIRVAIHDGYTLEDPRRPKNYSPKQYLRSEA 244
            A+ +A++Y++ VVA N+V F+T + FEAHE RV I DGY L D RRPK YSP+QY +S  
Sbjct: 176  AVKLAQKYNIGVVAHNDVHFMTRDDFEAHEARVCIADGYVLGDNRRPKTYSPEQYFKSSE 235

Query: 245  EMCELFADIPEALANSVEIAKRCNVTVRLGEYFLPNFPTG-GMAIEDFLVMKSREGLEER 303
            EM ELF+DIP A+ N+  IAKRCNVT++LG+YFLP++P   G  I+ F    S+EGLEER
Sbjct: 236  EMTELFSDIPSAIENTYHIAKRCNVTLQLGKYFLPDYPIPEGYTIDTFFAHLSKEGLEER 295

Query: 304  LEFLFPDPEVRAKRRPE----YDERLQVELDVINQMGFPGYFLIVMEFIQWSKDNDIPVG 359
            L FL+P PE R +  PE    YDER++ E+++IN MGFPGYFLIVM+FIQWSK+N +PVG
Sbjct: 296  LNFLYP-PEERDEYWPEIRKPYDERIEYEINIINSMGFPGYFLIVMDFIQWSKNNGVPVG 354

Query: 360  PGRGSGAGSLVAYALKITDLDPLEYDLLFERFLNPERVSMPDFDVDFCMDKRDQVIDHVA 419
            PGRGSGAGSLVAY+LKITDLDPL Y+LLFERFLNPERVSMPDFDVDFC+  RD+VID+VA
Sbjct: 355  PGRGSGAGSLVAYSLKITDLDPLRYELLFERFLNPERVSMPDFDVDFCIAGRDRVIDYVA 414

Query: 420  EMYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPFGFVDRISKLVPPDP-GMTLEKAFIAE 478
              YGRDAVSQI TFGTMAAK  IRDV RVLG  +G  DRISKL+P  P G++LE++  AE
Sbjct: 415  RTYGRDAVSQIATFGTMAAKGAIRDVARVLGKSYGLADRISKLIPTKPLGLSLEESLQAE 474

Query: 479  PALQEL--------YDADEEVKELIDKCRILEGCTRNAGKHAGGVVISPTAITDFAPIYC 530
            P L+++        YD   E+ E+  K   LEG TRN GKHAGGVVISPT ITDF+ + C
Sbjct: 475  PQLKDIVTNPSNPDYDDASEIWEMALK---LEGITRNTGKHAGGVVISPTKITDFSAVMC 531

Query: 531  DAEGNFPVTQFDKNDVETAGLVKFDFLGLRTLTIIDWALGLVNPRLKKAGKPPVRIEAIP 590
            DA+G   V QFDK+DVE AGLVKFDFLGLR LT+I+ A+  +N R+K     P+ I AIP
Sbjct: 532  DADGTARVAQFDKDDVEAAGLVKFDFLGLRNLTVIEDAVKNINKRIKS--DKPLDIAAIP 589

Query: 591  LDDARSFRNLQDAKTTAVFQLESRGMKELIKRLQPDCFEDIIALVALFRPGPLQSGMVDN 650
            L+D  ++    +A TTAVFQ ES GMK+++K  +P  FE+IIA V+L+RPGP+   ++ +
Sbjct: 590  LEDKDAYLVFANANTTAVFQFESVGMKKMLKEARPSKFEEIIAFVSLYRPGPMD--LIPD 647

Query: 651  FIDRKHGREAISYPDEKWQHESLKEILEPTYGIILYQEQVMQIAQVLSGYTLGGADMLRR 710
            FI R HG E       ++ H  L+ +LEPTYGI++YQEQVMQ AQ  +GYTLGGAD+LRR
Sbjct: 648  FIHRMHGGEF------EYLHPLLEGVLEPTYGIMVYQEQVMQAAQYCAGYTLGGADLLRR 701

Query: 711  AMGKKKPEEMAKQRAVFQEGAEKNGVDGELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQ 770
            AMGKKKPEEM KQR +F EGA K  +D   A  IFD +EKFAGYGFNKSH+AAYALV+YQ
Sbjct: 702  AMGKKKPEEMVKQRKIFIEGAAKKDIDEATANHIFDYMEKFAGYGFNKSHAAAYALVAYQ 761

Query: 771  TLWLKTHYPAEFMAAVMTADMDNTEKVVGLVDECKNMGLTVLPPDINSGLYRFNVDDNGA 830
            T WLK HYPAEF+AAVM+++M NT+ VV L+D+C+   L VLPP +N  +Y+F+  D   
Sbjct: 762  TAWLKAHYPAEFLAAVMSSEMQNTDNVVFLIDDCRKNNLEVLPPSVNMSIYQFHAIDEKT 821

Query: 831  IVYGIGAIKGVGEGPIEAILEARNKGGYFKDLFDFCARIDLKKVNKRVIEKLILAGALDR 890
            IVYG+GAIKGVGE  +++++++RN+ G +KDLFDFC RIDLKK+NKR +E LI AGALD 
Sbjct: 822  IVYGLGAIKGVGEAAMQSVIDSRNQQGPYKDLFDFCHRIDLKKINKRTLEALIRAGALDC 881

Query: 891  LGPHRAAMMASVDDAVRAASQHHQAEAFGQADMFGVLTDAPEEVEQKYTQ-VPEWPEKVR 949
            LG  RA +MA + +AV+AA Q  Q    G  D+FG +    EE+++K  + V  W ++VR
Sbjct: 882  LGIERADLMAQLPEAVQAADQARQNRETGIMDLFGEV----EEIQRKPAKPVKPWSDEVR 937

Query: 950  LEGERETLGLYLTGHPVDEYLKELTKYTSCRLNEAAPTRRDQSLTVAGLVIAARVMTTKR 1009
            L+GE++TLGLYLTGHP++ Y  EL  +   RLNE  PTRR  +   AGLVI       + 
Sbjct: 938  LKGEKDTLGLYLTGHPINVYRPELKSFVPSRLNELTPTRRGVTTVFAGLVIDVANFPNR- 996

Query: 1010 GTRIGLMTLDDRSGRMEVMLYSEALDRYAEWLEKDKILVVSGQVSFDDFNGGLKMSAR-- 1067
                 ++TLDD + R+EV    E   R+ + ++ +K++V+ G++   +  G  +  AR  
Sbjct: 997  ----VMITLDDGTARVEVSCNHERFQRFKDIIQPEKVVVIEGEIY--EREGYERPMARLS 1050

Query: 1068 EVMDLGSAREKFARGLSISILQSQIDQQFFERFSHILEPH----RAGTVPVNVYYQRPDA 1123
            +   L   R+K A  + I +    +          IL P+        +PV ++ ++P A
Sbjct: 1051 KAFSLNEIRQKRANSIKIQLSDDLLGPALGLELQKILAPYCNIDMYQHIPVQLFIEQPYA 1110

Query: 1124 RARLTLGTEWRVTPSDTLLDELKQLLGHDQVELEF 1158
             A L LG  W+V P D LL +L+   G + + +E+
Sbjct: 1111 TAELHLGPSWKVAPLDELLAKLRDYFGKEALHIEY 1145