Pairwise Alignments

Query, 532 a.a., lytic transglycosylase from Vibrio cholerae E7946 ATCC 55056

Subject, 346 a.a., transglycosylase SLT domain-containing protein from Rhodanobacter sp000427505 FW510-R12

 Score =  130 bits (326), Expect = 1e-34
 Identities = 97/379 (25%), Positives = 162/379 (42%), Gaps = 54/379 (14%)

Query: 87  GIPKDPSVDAQREWFLKNPGHLQAIASRAEPFLYLITEKVEQRGLPLELVLLPIVESSFD 146
           G   DP+V A    + ++P   ++      P L  + +  ++  +  E VLLP VES F 
Sbjct: 3   GCDADPAVLAWARHYTRHPRQFESQLQAVLPRLVYVQQVADRYDVAGEFVLLPWVESRFQ 62

Query: 147 PFAYSHGSAAGLWQFISSTGKRYGLKQNFWYDGRRDVAAATDAALDYLTVLNQHFDGDWY 206
           P A      AG+WQ +  T    GL+ +  YDGR DV AA +A +  L   ++ F  DW 
Sbjct: 63  PVAARKRRPAGMWQIMPMTAGAMGLRVDGHYDGRLDVPAAANAVMKLLEQYHEQFQ-DWR 121

Query: 207 HAIAAYNSGEGRVARAIKANKKAGKPIDFFSLDLPKETSGYVPKLIALADVIANQEKYGI 266
            A  AYN+GE ++ + I+ +    +      L + K T  ++ +L+ +A V+   E++ +
Sbjct: 122 VADYAYNAGEFKIRQMIQTHGMPAEQPAIPHLPVRKVTREHLTRLLGMACVVREPERFNV 181

Query: 267 SIPAIENRPVLATVDPKEQLDLAIAARYAGLTVKELQSFNPAYNQWATAPNGPHQLLIPV 326
           S+P + +   L   +    + +  AA +AG++V+ L+  NPA+       +    L++P 
Sbjct: 182 SLPTLPDEQQLVRTELSRSMPITRAADHAGMSVEALRHLNPAFRSNTIDASTAPYLILPA 241

Query: 327 EKVERFNLAMEENRGKGIKVVRYKVKSGDTLSTIADKYNTTAKVIKEANQIASNQIRVGS 386
               +F  A+ E               GD L+++                IA+       
Sbjct: 242 RHARQFRDALLEQASSA---------GGDLLASLG------------GGDIAARP----- 275

Query: 387 YLFVPTSVKDEKAYALSVSNRLAKTQSVPRGQYQLTHTVNSGESLWTIAKQYNVPYQSLA 446
              VP      K                       THTV  G+SLW IA+ Y++    L 
Sbjct: 276 ---VPDPSTARK-----------------------THTVRHGDSLWQIARAYSISVSQLQ 309

Query: 447 KWNGMAPKDALRKGQKLVI 465
           +WN +    AL+ GQ L +
Sbjct: 310 RWNRLG-SHALKPGQTLTV 327



 Score = 32.7 bits (73), Expect = 2e-05
 Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 1/42 (2%)

Query: 480 TYKVRSGDTLSGIANKFKVKTADIVKWNDLNSTQYLKAGQQL 521
           T+ VR GD+L  IA  + +  + + +WN L S   LK GQ L
Sbjct: 285 THTVRHGDSLWQIARAYSISVSQLQRWNRLGS-HALKPGQTL 325