Pairwise Alignments

Query, 532 a.a., lytic transglycosylase from Vibrio cholerae E7946 ATCC 55056

Subject, 288 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score = 48.5 bits (114), Expect = 3e-10
 Identities = 56/165 (33%), Positives = 69/165 (41%), Gaps = 24/165 (14%)

Query: 121 LITEKVEQRGLPLE-LVLLPIVESSFDPFAYSHGSAAGLWQFISSTGKRYGLKQNFWYDG 179
           LI     + GLP   L  L   ESSF P   S   A G+ QF+  T K  GL   F    
Sbjct: 40  LIDTAAGKEGLPASFLTRLIWQESSFRPDVVSRAGAQGIAQFMPGTAKERGLVDPF---- 95

Query: 180 RRDVAAATDAALDYLTVLNQHFDGDWYHAIAAYNSGEGRVARAIKANKKAGKPIDFFSLD 239
             D  AA  A+   +  LN+ F G+   A AAYN+G GRV   +                
Sbjct: 96  --DPEAAIPASAALIADLNRRF-GNLGLAAAAYNAGPGRVNGFLSGG------------G 140

Query: 240 LPKETSGYVPKLIA-LADVIANQEKYGISI--PA-IENRPVLATV 280
           LP ET  YV  +    A+  A  +K G +   PA     P LATV
Sbjct: 141 LPNETRAYVRIITGRTAEDWAGLKKQGTAAFGPADFPPEPCLATV 185